Gene Information

Name : BYI23_B012000 (BYI23_B012000)
Accession : YP_005042694.1
Strain :
Genome accession: NC_016625
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1393374 - 1394045 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence :
ATGACCATCCTCGTGATCGAAGACGACCGCAAGACCGGCGACTACCTGAAAAAAGGGCTCATCGAGTCCGGTTATCAGGT
CGAACTCGTGCGCAACGGCACGGATGGGCTGCATCAGGCGCTCGCGAACAACTACGAGCTGATCGTGCTCGACGTGATGC
TGCCGGGCATCGACGGCTGGCAGATCATGTCGGCCTTGCGGGCGAAACGTGACTTGCCTGTCATTTTTCTCACAGCGCGC
GATCATGTCACCGATCGCATTCACGGCCTCGAACTCGGCGCGGACGATTATCTCGTCAAGCCGTTCTCCTTCACCGAACT
CGTGCTGCGCATCCGCACGCTTTTACGGCGCGGCGTGATGCGCGAATCGGACACGTTTCAGATTGCCGATCTTCATGTCG
ATGTGCTGCGTCGCAAAGTGACGCGTCAAGGCACCGATATCGCGCTGACGAACAAGGAGTTCGCGCTGCTGCATCTCTTC
TGCAAGCATCAGGGCGAAGCGCTTTCGCGCACGCTGATCGCCTCCGAAGTGTGGGACATGAACTTCGACAGCGACACGAA
CGTCGTGGATGTCGCGGTGAAGCGCCTGCGCGCGAAGATCGACAATCCGTTCGATCTGAAGCTGATTCACACGGTGCGCA
GCATCGGCTATTCGTTCGGGGAGAATCCTTGA

Protein sequence :
MTILVIEDDRKTGDYLKKGLIESGYQVELVRNGTDGLHQALANNYELIVLDVMLPGIDGWQIMSALRAKRDLPVIFLTAR
DHVTDRIHGLELGADDYLVKPFSFTELVLRIRTLLRRGVMRESDTFQIADLHVDVLRRKVTRQGTDIALTNKEFALLHLF
CKHQGEALSRTLIASEVWDMNFDSDTNVVDVAVKRLRAKIDNPFDLKLIHTVRSIGYSFGENP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-56 54
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-55 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BYI23_B012000 YP_005042694.1 two component heavy metal response transcriptional regulator, winged helix family BAC0111 Protein 2e-66 61
BYI23_B012000 YP_005042694.1 two component heavy metal response transcriptional regulator, winged helix family BAC0308 Protein 4e-62 61
BYI23_B012000 YP_005042694.1 two component heavy metal response transcriptional regulator, winged helix family BAC0197 Protein 3e-66 61
BYI23_B012000 YP_005042694.1 two component heavy metal response transcriptional regulator, winged helix family BAC0125 Protein 3e-65 59
BYI23_B012000 YP_005042694.1 two component heavy metal response transcriptional regulator, winged helix family BAC0083 Protein 1e-64 59
BYI23_B012000 YP_005042694.1 two component heavy metal response transcriptional regulator, winged helix family BAC0638 Protein 6e-59 58
BYI23_B012000 YP_005042694.1 two component heavy metal response transcriptional regulator, winged helix family BAC0347 Protein 3e-57 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BYI23_B012000 YP_005042694.1 two component heavy metal response transcriptional regulator, winged helix family VFG0596 Protein 4e-57 54
BYI23_B012000 YP_005042694.1 two component heavy metal response transcriptional regulator, winged helix family VFG1389 Protein 4e-36 43
BYI23_B012000 YP_005042694.1 two component heavy metal response transcriptional regulator, winged helix family VFG1390 Protein 7e-39 41