Gene Information

Name : AZOLI_p50108 (AZOLI_p50108)
Accession : YP_005041188.1
Strain :
Genome accession: NC_016624
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transporter, large permease component (DctM-like)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 103831 - 105105 bp
Length : 1275 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 14668138; Product type t : transporter

DNA sequence :
ATGGTCACCGCACTGTTCCTCACCTTCGCCGTCCTGCTGATCCTGGGCGCACCGGTCGGCATCGCGCTGGGCGGCGCCTC
GGCCGTTTATCTGGTCGGCAGCGACATCGACCTCGCGGTGGTTCCGCAGTTCATGTATGCCGGCATGGACAGCTTCGTGC
TGCTCTGCATCCCCGGCTTCGTGCTGGCCGGCAACCTGATGAACGGCGGCGGCATCACCGACCAGATCGTTCTGTTCAGC
AACCGGCTGGTCGGCCATATCCGCGGCGGCCTCGGCCTTGCCAACGTGACGGGATCGATGGTGTTCGCCGGCATCTCCGG
CACCGCGGTGGCGGAGACCGCCTCCATCGGCGCGGTGATGATCCCGGCGATGCGCAAGTCCGGCTACGACGCACCCTTCG
CCGCCGCGGTGACCGCCGCCGCCTCCACCGTCGGACCGATCATCCCGCCCAGCGTGCCGATGATCATCGTCGGCACGTTG
ACCGGCCTGTCGGTCGGCAAGATGTTCATGGCCGGCGCCATTCCGGGCCTGCTGCTCGGCATCGGCATGATGCTGACGGT
CTGGATCCTGGCGCGGGTGCGCAATTATCCCAAGGAGCCCTGGCAGGGCTTCGGCGCGCTGCTCCGCGCCAGCCGCGGCG
CCTTCTGGGCGCTGCTGATGACGGCGATCATCCTGTTCGGCATCGTCGGCGGCTATTTCACCCCGACCGAGGCCTCCATC
GTCGCGGCGCTCTACGCCTTCGTCATCGGCCTGTTCGTCTACAAGGGCTTCACCCTGCGCCAGCTGCCGGCGATCCTGCT
GGAAAGCGCCATCGGGTCGGGCGGGCTGATCCTGCTGGTGGGCCTCGCCAACGTCTTCGGCTGGATCCTGACCAGCGAGC
AGATTCCGCAGGCCATCGCCGCCGCGATGCTGGCGCTGACCACCGACAAGTACCTGATCATCCTGATGATCAATATCCTG
CTGCTGTTCGTCGGCACCTTCATGGAGACGATCGCGGCGCTGATCATCCTGTTCCCGCCGCTGCTGGCGGTGGCGACCCA
GGTCGGCATCGATCCGATCCATTTCGCCACCTTCGCCGTGCTGAACCTGATGATCGGCCTGACCACCCCGCCGGTCGGCG
TCTGCCTGTTCGTCGCCGCCAACATCGCGAAGATCTCGCTCGGTGCCATCACCAAGGCGATCTGGCCCTTCCTGCTCTGC
AACATCGTGATCCTGTTGCTGGTCTCCTACATCCCGGCCCTGTCGCTGTGGCTGCCGAGCCTGCTTTTCCGCTGA

Protein sequence :
MVTALFLTFAVLLILGAPVGIALGGASAVYLVGSDIDLAVVPQFMYAGMDSFVLLCIPGFVLAGNLMNGGGITDQIVLFS
NRLVGHIRGGLGLANVTGSMVFAGISGTAVAETASIGAVMIPAMRKSGYDAPFAAAVTAAASTVGPIIPPSVPMIIVGTL
TGLSVGKMFMAGAIPGLLLGIGMMLTVWILARVRNYPKEPWQGFGALLRASRGAFWALLMTAIILFGIVGGYFTPTEASI
VAALYAFVIGLFVYKGFTLRQLPAILLESAIGSGGLILLVGLANVFGWILTSEQIPQAIAAAMLALTTDKYLIILMINIL
LLFVGTFMETIAALIILFPPLLAVATQVGIDPIHFATFAVLNLMIGLTTPPVGVCLFVAANIAKISLGAITKAIWPFLLC
NIVILLLVSYIPALSLWLPSLLFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 1e-43 42
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 1e-43 42
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 9e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZOLI_p50108 YP_005041188.1 TRAP dicarboxylate transporter, large permease component (DctM-like) VFG1110 Protein 5e-44 42