Gene Information

Name : AZOLI_p30580 (AZOLI_p30580)
Accession : YP_005041068.1
Strain :
Genome accession: NC_016623
Putative virulence/resistance : Resistance
Product : Glycine betaine/choline ABC transporter, ATP-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 629144 - 630088 bp
Length : 945 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15251200, 10216873; Product type e : enzyme

DNA sequence : 
ATGATCGATTTCGAGCGCGTGAGCAAGCGCTTCGGCTCCTGGACGGCGGTCGACACCGTGTCCTTCAGCGTGGCGGAGGG
CGAGTTCCGCGTGCTGATCGGCCCGTCCGGCTCCGGCAAATCGACGGTGCTGCGCATGATCAACCGGCTGATCCCGGCGG
ACGAGGGCGCCATCCGCATCGACGGCGAGGACATCGCCTCCCTGAAGCCGGAGGAACTGCGCCGGCGCATGGGCTATGTC
ATCCAGTCGGTCGGCCTGTTCCCGCATTGGACGGTGGAGCGCAACATCGCCACCGTGCCGGCCTTGCTGGGCTGGCCGAA
GCCGCGCATCCGCGACCGGGTGACGGAGCTGCTGGAGCTGCTGAACCTCGACCCGCGCCGCTACCGCTCCGCCTATCCGC
ACCAGCTGTCCGGCGGGCAGCAGCAGCGCGTCGGCGTCGCCCGCGCGCTGGCGGCGGAGCCGCGCATCCTGCTGATGGAT
GAGCCGTTCAGCGCGCTGGATCCCATCACCCGCGCCAGCCTGCAGACGGAACTGGCGACCATCCACCGCCGCACCGGCAC
GACCGTGGTCTTCGTCACCCACGACATGGACGAGGCCTTGCGGCTGGGCGACAGCATCGCGGTTATGGACCATGGCCGCC
TGATCCAATGCGCCACCCCGCTGGAAATCCTGACCCGCCCGGCCAGCCCGCTGGTGCGCGACCTCGTGGGGCGGGAGGAA
TGGGGGCTGAAGCGGCTGGCGGTGGAGACGGCAGGCGACCGTGCCCGCCCGCAGGAACGCGTGGGCGGCGAGCCGCTGCC
GTCCGAAACGCCGCTTCACCGCGCCCTGTCGGAAATGGTTTCCCGCGGCGCCGAGCGGCTGCCGGTGGTGGATGGTGACG
GCCAGCCCGCCGGGGTGCTGCACCTGTCCGATCTCGTCCGTCCAGCGCCGGACCGGGCGGCATGA

Protein sequence : 
MIDFERVSKRFGSWTAVDTVSFSVAEGEFRVLIGPSGSGKSTVLRMINRLIPADEGAIRIDGEDIASLKPEELRRRMGYV
IQSVGLFPHWTVERNIATVPALLGWPKPRIRDRVTELLELLNLDPRRYRSAYPHQLSGGQQQRVGVARALAAEPRILLMD
EPFSALDPITRASLQTELATIHRRTGTTVVFVTHDMDEALRLGDSIAVMDHGRLIQCATPLEILTRPASPLVRDLVGREE
WGLKRLAVETAGDRARPQERVGGEPLPSETPLHRALSEMVSRGAERLPVVDGDGQPAGVLHLSDLVRPAPDRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-51 50
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-51 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZOLI_p30580 YP_005041068.1 Glycine betaine/choline ABC transporter, ATP-binding component BAC0604 Protein 5e-32 41