Gene Information

Name : clpB2 (AZOLI_p30461)
Accession : YP_005040955.1
Strain :
Genome accession: NC_016623
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 491600 - 494284 bp
Length : 2685 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12054807, 12220194, 14550559, 14640692; Product type f : factor

DNA sequence :
ATGGACTTCGGTCAATTCACCGATCGTGCGCGCAGTGCCATTCAGGCCGCGCAGATCGCCGCCCTTGCCGAGCGGCATCA
ACAGCTTCTCCCCGAACATCTGCTGAAGGCGCTGATCGACGACGCCAGCGGCGTGGCGGCGCGTCTGGTGCGCGATACCG
GCGGCGATCCCGACCTGCTGAAGTCCGCGACCGAGGAACAGCTGTCGCGCGCTCCGGTCCAGCCGGGTGCCAACGAAGGC
CCGCAGCCGCTCTACATGTCGCCGGCGCTGGCCGCCGTGCTGCAGGGCGCCGTCGCCTCGGCGCGCAACGGCGGCGACCG
CTTCGTCACCGCCGAACGGCTGCTGGAAAGCCTCGCCCGCCAGAGCGGCCCGCTGCGCGCCCTGTTCCGCCGCGCCGGCG
TCGATGCCGACGCGCTGGCCGCCGCCGCCGATGCCCAGCGCAAGGACCATCCCGCCGACGCGGAGACCGAAACCACCTCC
GGCGAGGCGCTGGCCCGCTACACCCGCGACCTGACGGAAGAGGCGCGGCAGGGCCGGCTCGACCCGGTGATCGGCCGTGA
CGACGAGATCCGCCGCACCATCCAGGTCCTGGCCCGCCGCACCAAGAACAACCCCGTGCTGATCGGCGAGCCCGGCGTCG
GCAAGACCGCCGTGGTCGAGGGGCTGGCCCAGCGTCTGGCCTCCGGCGACGTGCCGGAAGGGCTGAAGGACCGGCGCGTC
CTGGCGCTCGACCTCACCGCGCTGCTGGCCGGCGCCAAGTTCCGCGGCGAGTTCGAGGAGCGGCTGAAGTCGGTCCTGAG
CGAGGTGCAGGAGGCCAACGGCCGCATCATCCTGTTCATCGACGAGCTGCACACCCTGATCGGCGCCGGCCGCACCGACG
GGGCGATGGACGCCGCCAACATGCTGAAGCCCGCGCTGGCGCGCGGCGAGCTGCGCTGCGTCGGCGCCACCACGCCGGAC
GAGTACCGCAAATACATCGAGAAGGACGCGGCGCTCGCCCGTCGCTTCCAGCCGGTGACGGTTGACGAGCCGTCGGTGGA
CGACGCCGTGTCGATCCTGCGCGGCATCAAGGGCAAGTACGAGGTGCACCACGGCGTGCGCATCGCCGACGCGGCGGTGG
TCGCGGCGGTCAACCTGTCGGCGCGCTACATCGGCGACCGCCGGCTGCCCGACAAGGCCATCGACCTCGTCGACGAGGCG
GCGAGCCGCCTGCGCATGGCCATCGACAGCAAGCCGGAGGCGCTCGACGCCGTCGACCGCCGCGTCGCCCAGCTGAAGAT
CGAACGCGAGGCGCTGAAGGCCGAGCCGGACGCCGCCTCGCAGGAACGGCTGCACGTCCTGGAAGGCGAACTGGTCGAGG
CGGAAGCCCGCCAGTCCTCGATGGAGGAGGAGTGGCGCGCCTCGCAGTCCCGCCGCACCGAGGGCCGCCGCCTGAAGGAG
GAGCTTGACCAGGCCCGCACCAGGCTGGAGCGCGCCCAGCGCGACGGCGACTGGGCCAAGGCCGGCGAGCTGGCCTATGG
CGTGGTGCCCGACCTGGAGAAGCGTCTGGCCGAGGCCGAATCGCGCGCCAGCACCGAGCGTGACGAGGTGACGGCCAAGG
ACATCGGCGCCGTCGTCACCCGCTGGACCGGCATCCCGGTCGAACGGATGCTGGAAGGCGAACGCCAGCGGCTGAAGGGC
ATGGAGGACAAGCTGGCGGAGCGCGTCGTCGGCCAGAAGGAGGCGGTGCGCGCGGTGTCCAAGGCGGTGCGGCGTGCCCG
TGCCGGGCTGAAGGACCCCAGCCGGCCGACCGGTTCCTTCCTGTTCCTCGGCCCCACCGGCGTCGGCAAGACCGAGCTGG
CCAAGGCGCTGGCCGCCTTCCTGTTCGACGACGAGACGGCGATCACCCGCCTCGACATGTCGGAGTATATGGAGAAGCAC
GCGGTCAGCCGCATGATCGGCTCGCCGCCGGGCTATGTCGGCTATGACGACGGCGGCTCGCTGGCCGAACGCATCCGGCG
CCGGCCCTATCAGGTCGTGCTGCTGGACGAGGTGGAGAAGGCCCATCCCGACGTGCTGAACGTCCTGCTGCAGGCGCTCG
ACGATGGGCGGCTGACCGACGGGCAGGGCCGCACCGCCGATTTCCGCCACGCCATCCTCATCATGACCTCCAACCTGGGG
GCCGAGGCGCTGAGCGCCTTGGGCGACGACGAGGACATGGCCGGCGTGACGGTGGAGGTGATGGACGCGGTGCGCAAGGC
CTTCCGGCCGGAATTCCTCAACCGGTTGGACGATGTCCTGATCTTCCGCCGGCTGGGCCGGGACCAGATGTCGCGGATCG
TCGATATCCAGCTGGCTCGCGTCAACGAGCGGCTGGCCGAGCGCGGCGTCACCCTGGCGGCGGACGCCGCAGCCAAGCGG
CGGCTCGGCGATCTGGGCTGGGATCCGGCCTTCGGCGCCCGTCCGCTGAAGCGCGCCATCCAGGGCCTTGTCGAGGATCC
CATCGCCGAGCGCCTGCTCGACGAGGAGGTGGAGGGCAAGACCACCATGACCCTGTCGGTCGTCGATGGCCGGCTGGCTC
TGGACGGCGTCGTGGTCGAGGAGGACCGCGCCCACGGCTTCAAGGCGCCGGAGCGTCCGCCGCTGGGCTTCGCCCTGCCG
CCGGTGGCAAGTTCCGCCAACGGACGGGAGGCATCGGTCCACTGA

Protein sequence :
MDFGQFTDRARSAIQAAQIAALAERHQQLLPEHLLKALIDDASGVAARLVRDTGGDPDLLKSATEEQLSRAPVQPGANEG
PQPLYMSPALAAVLQGAVASARNGGDRFVTAERLLESLARQSGPLRALFRRAGVDADALAAAADAQRKDHPADAETETTS
GEALARYTRDLTEEARQGRLDPVIGRDDEIRRTIQVLARRTKNNPVLIGEPGVGKTAVVEGLAQRLASGDVPEGLKDRRV
LALDLTALLAGAKFRGEFEERLKSVLSEVQEANGRIILFIDELHTLIGAGRTDGAMDAANMLKPALARGELRCVGATTPD
EYRKYIEKDAALARRFQPVTVDEPSVDDAVSILRGIKGKYEVHHGVRIADAAVVAAVNLSARYIGDRRLPDKAIDLVDEA
ASRLRMAIDSKPEALDAVDRRVAQLKIEREALKAEPDAASQERLHVLEGELVEAEARQSSMEEEWRASQSRRTEGRRLKE
ELDQARTRLERAQRDGDWAKAGELAYGVVPDLEKRLAEAESRASTERDEVTAKDIGAVVTRWTGIPVERMLEGERQRLKG
MEDKLAERVVGQKEAVRAVSKAVRRARAGLKDPSRPTGSFLFLGPTGVGKTELAKALAAFLFDDETAITRLDMSEYMEKH
AVSRMIGSPPGYVGYDDGGSLAERIRRRPYQVVLLDEVEKAHPDVLNVLLQALDDGRLTDGQGRTADFRHAILIMTSNLG
AEALSALGDDEDMAGVTVEVMDAVRKAFRPEFLNRLDDVLIFRRLGRDQMSRIVDIQLARVNERLAERGVTLAADAAAKR
RLGDLGWDPAFGARPLKRAIQGLVEDPIAERLLDEEVEGKTTMTLSVVDGRLALDGVVVEEDRAHGFKAPERPPLGFALP
PVASSANGREASVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 5e-140 48
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-92 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpB2 YP_005040955.1 ATP-dependent chaperone VFG0079 Protein 8e-155 44
clpB2 YP_005040955.1 ATP-dependent chaperone VFG2076 Protein 1e-107 43
clpB2 YP_005040955.1 ATP-dependent chaperone VFG2084 Protein 2e-103 42