Gene Information

Name : dppD3 (AZOLI_p30401)
Accession : YP_005040903.1
Strain :
Genome accession: NC_016623
Putative virulence/resistance : Unknown
Product : Dipeptide ABC transporter, ATP-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 431078 - 432772 bp
Length : 1695 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7536291; Product type t : transporter

DNA sequence :
ATGAGCCTGTCCGAACTGACCCGCATCCCGACGGAGACCGCCGCCATGACGACCACGCCTCTTCTCGATGTGCGCGGCCT
CAGCATCGCGCTGCCGCCGGGCGCCGACCGCCCGCTGGCGGTGGACAACCTGACCTTCACCTTGAACCCCGACGAGATCC
TCTGCGTGGTCGGCGAGTCCGGCTCCGGCAAGTCGATGACCGCGCACGCCATGATGGGCCTGCTGCCCACCCCGCATGTG
CGGGTCGCCGGCGGCAGCCTGCTGTTCAAGGGCAAGGACGTGCTGACCATGCCGGAGGCCGAGCAGCGGAGCTTGCGCGG
CGGCCGCATCGCCATGGTGTTCCAGGAGCCGATGACGGCGCTGAACCCGCTGATGCGGGTCGGCCGCCAGATCGGCGAGA
GCTTGCGCGAGCACACCGACCTGCCCTCCCCCGCCCGCCGCGCCCGCGTGGTTGAGCTGCTGGCCCAGGTCGGCCTGCCC
AACCCCGCCGAACTGGCCGAGGCCTATCCCTTCCGCCTGTCGGGCGGCCAGCGCCAGCGCGTGATGATCGCCATGGCGCT
GGCCTGCCAGCCCGACATCCTGATCGCCGACGAGCCGACCACCGCGCTGGACGTCACCACCCAGAAGCAGATCCTCGACC
TGATCCGCTCGATCCAGGCCAAACGCCACATGGGCATGATGTTCATCACCCACGACTTCGGCGTGGTGGCGGAGATCGCC
CATCGGGTGGCGGTGATGCGCCACGGCAAGCTGGTGGAATACGGCCCGGCGTCCGACGTGCTGAACCGGCCGCAGCATCC
CTACACCCGGCAGCTGATCGCCTCGGTTCCGCACTACATCGAGCACCGCGACGACCATGCCAAGGTCGGCGCGCCGCTGC
TGGTCGCCGACAAGGTTCGCAAGGTGTTCAACGTCGGCGGCGGGCTGTTCAAGAAATCCAAGCAGGTGGTGGCCGGCGAC
GACCTGTCGCTGACCATCCATCCCGGCGAGACCGTGGGGCTGGTCGGAGAATCGGGATCGGGCAAATCGACGCTCGGCCG
CTCCATCGTCGGCCTCATCAAGCCGGATTCGGGCCGCATCCTGTTCGAGGGCACCGACCTGCTGGCGCTCGACCGCAAGG
GCTTCCAGCCTTACCGCCGGGCGGTGCAGATGGTGTTCCAGGACCCCTACGCCTCGCTGAACCCGCGCCACCGCGTCGGC
GACATCGTGGCCCAGGGGCCGGTCGCCTTCGGCGAGGACCGCAACAAGGCGCTGACCCGCGCGCGGGAGTTGCTGGCGAT
GGTGGGGCTGGATGGGTCGGCCGCCGACCGCTACCCGCACGAGTTCTCCGGCGGCCAGCGCCAGCGAATCGGCATCGCCC
GCGCGCTCGCCATGGAGCCGAAGCTGCTGGTGGCGGACGAGCCGGTGTCGGCGCTCGACGTATCGGTGCAGGGGCAGGTG
CTGGAACTGCTGGACGACATCCGCAAGCGGCTGAACCTCGCCATGCTGTTCATCACCCACGATCTGCGGGTGGCGGCGCA
GGTCTGCGACACCATCGCGGTGATGCGCCGCGGACGGATCGTCGAGCTGGGCACGGCGCGGCAGGTGTTCACTCATCCGC
GCGACGCCTACACCCGCAGCCTGCTCGACGCCATCCCCGGCAAGGGCTGGCACATCCCGGACGACCTTCAGCAAGTCCCG
GCGGGAGCGCACTGA

Protein sequence :
MSLSELTRIPTETAAMTTTPLLDVRGLSIALPPGADRPLAVDNLTFTLNPDEILCVVGESGSGKSMTAHAMMGLLPTPHV
RVAGGSLLFKGKDVLTMPEAEQRSLRGGRIAMVFQEPMTALNPLMRVGRQIGESLREHTDLPSPARRARVVELLAQVGLP
NPAELAEAYPFRLSGGQRQRVMIAMALACQPDILIADEPTTALDVTTQKQILDLIRSIQAKRHMGMMFITHDFGVVAEIA
HRVAVMRHGKLVEYGPASDVLNRPQHPYTRQLIASVPHYIEHRDDHAKVGAPLLVADKVRKVFNVGGGLFKKSKQVVAGD
DLSLTIHPGETVGLVGESGSGKSTLGRSIVGLIKPDSGRILFEGTDLLALDRKGFQPYRRAVQMVFQDPYASLNPRHRVG
DIVAQGPVAFGEDRNKALTRARELLAMVGLDGSAADRYPHEFSGGQRQRIGIARALAMEPKLLVADEPVSALDVSVQGQV
LELLDDIRKRLNLAMLFITHDLRVAAQVCDTIAVMRRGRIVELGTARQVFTHPRDAYTRSLLDAIPGKGWHIPDDLQQVP
AGAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-86 45
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-86 45
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 6e-86 45
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 6e-86 45
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-103 43