Gene Information

Name : AZOLI_0984 (AZOLI_0984)
Accession : YP_005038558.1
Strain : Azospirillum lipoferum 4B
Genome accession: NC_016622
Putative virulence/resistance : Virulence
Product : Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 910768 - 911454 bp
Length : 687 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11004187, 11399769; Product type r : regulator

DNA sequence :
GTGCTCATGAAGATTCTCGTCATTGAAGATGATCGCCAGGCCGCCAGCTACCTCGCCAAGGGGCTGAAGGAGGCGGGCCA
TGTGGTGGACGTCGCCAACGACGGGAAGGAGGGCCTGTTCCTTGCCGGCGCCGAGCATTACGACGTGATGATCGTCGACC
GCATGCTGCCGGGCCGCGACGGGCTGTCGCTGGTCCAGGTTCTGCGGGCGGCCGGCAACGACACGCCGGTCCTGTTCCTG
TCGGCGCTGGGCAGCGTCGACGACCGGGTGAAGGGCCTGAAGGCCGGCGGCGACGATTACCTGACCAAGCCCTTCGCCTT
CTCCGAGCTTCTCGCCCGCATCGAGGTGCTGGTGCGCCGCCGGGGCGCGGCCCAGCCGCAGACCCGGCTGGTGGTGGGCG
ACCTGGAGCTGGACCTGCTGTCGCGCAGCGTCAAGCGCGCCGGCAAGACCATCGACCTGCTGCCGCGCGAGTTCTCGCTG
CTGGAATATCTGATGCGCAACGCCGGCAGCGTGGTGACCCGCACCATGATGCTGGAGAATGTCTGGGACTATCACTTCGA
TCCCCAGACCAACGTCATCGACGTGCACATCGCCCGTCTGCGCCAGAAGATCGACAAGGATTTCCCCACCCCCCTGATCC
ATACCGTGCGCGGCGCCGGCTACAGCCTGCGCGTGGCGGAGGGGTGA

Protein sequence :
MLMKILVIEDDRQAASYLAKGLKEAGHVVDVANDGKEGLFLAGAEHYDVMIVDRMLPGRDGLSLVQVLRAAGNDTPVLFL
SALGSVDDRVKGLKAGGDDYLTKPFAFSELLARIEVLVRRRGAAQPQTRLVVGDLELDLLSRSVKRAGKTIDLLPREFSL
LEYLMRNAGSVVTRTMMLENVWDYHFDPQTNVIDVHIARLRQKIDKDFPTPLIHTVRGAGYSLRVAEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-46 49
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-46 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZOLI_0984 YP_005038558.1 Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis BAC0083 Protein 1e-53 52
AZOLI_0984 YP_005038558.1 Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis BAC0125 Protein 6e-53 52
AZOLI_0984 YP_005038558.1 Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis BAC0638 Protein 2e-47 52
AZOLI_0984 YP_005038558.1 Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis BAC0347 Protein 9e-53 50
AZOLI_0984 YP_005038558.1 Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis BAC0111 Protein 9e-58 50
AZOLI_0984 YP_005038558.1 Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis BAC0197 Protein 1e-48 50
AZOLI_0984 YP_005038558.1 Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis BAC0308 Protein 7e-50 47
AZOLI_0984 YP_005038558.1 Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis BAC0487 Protein 2e-32 41
AZOLI_0984 YP_005038558.1 Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis HE999704.1.gene1528. Protein 4e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZOLI_0984 YP_005038558.1 Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis VFG0596 Protein 6e-47 49
AZOLI_0984 YP_005038558.1 Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis VFG1389 Protein 7e-38 46
AZOLI_0984 YP_005038558.1 Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis VFG1390 Protein 7e-42 43
AZOLI_0984 YP_005038558.1 Two-component transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis VFG1386 Protein 1e-38 42