Gene Information

Name : rph (AZOLI_3015)
Accession : YP_005040392.1
Strain : Azospirillum lipoferum 4B
Genome accession: NC_016622
Putative virulence/resistance : Unknown
Product : RNase PH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2837818 - 2838537 bp
Length : 720 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1512252, 1885537, 6207018; Product type e : enzyme

DNA sequence :
ATGCGCCCCTCCGGCCGCGCCTTCGACCAACTGCGCACCGTCTCCCTCGAACCCGGCTTCAGCCGCTATGCCGAGGGCTC
CTGCATGGTGCGCTTCGGCAACACGCATGTGCTGTGCACGGCCAGCGTCGACGAGACGGTGCCGCGCTTCCTGAAGAACA
CCGGGCTCGGCTGGGTCACCGCCGAATACGGCATGCTGCCGCGCTCCACCCACAGCCGCACCGACCGCGAGGCGGCGAAG
GGCAAGCAGTCCGGCCGCACCCAGGAGATCCAGCGGCTGATCGGCCGCGCCCTGCGCGCCGTCACCGACCGTTCGGCGAT
GGGCGAGAAGCAGATCAAGATCGACTGCGACGTCATCCAGGCCGACGGCGGCACCCGCACCGCCGCCATCACCGGCAGCT
ATGTCGCCCTGCATCTGGCCTTCCAGCACCTGATGCAGATCGGCGCGCTGAAGACCATGCCGCTGACCGATCAGGTCGCC
GCCGTGTCCTGCGGCCTGTTCCAGGGCAACGCCGTGCTCGACCTCGACTATGACGAGGATTCCAAGGCCCAGGCCGATGC
CAACTTCGTCCTGACCGGCAAGGCCGGCATCGTCGAAATCCAGGGCACCGCCGAGGAAACCCCCTTCTCCGAGCCGCAGT
TCATGGAGCTGCTGGCGCTCGCCCGCAAGGGCGTGAACGAGCTGGTGACGTTGCAGAAGCAGGTTCTCGGCATCAAGTAA

Protein sequence :
MRPSGRAFDQLRTVSLEPGFSRYAEGSCMVRFGNTHVLCTASVDETVPRFLKNTGLGWVTAEYGMLPRSTHSRTDREAAK
GKQSGRTQEIQRLIGRALRAVTDRSAMGEKQIKIDCDVIQADGGTRTAAITGSYVALHLAFQHLMQIGALKTMPLTDQVA
AVSCGLFQGNAVLDLDYDEDSKAQADANFVLTGKAGIVEIQGTAEETPFSEPQFMELLALARKGVNELVTLQKQVLGIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 3e-55 52