Gene Information

Name : AZOLI_3000 (AZOLI_3000)
Accession : YP_005040378.1
Strain : Azospirillum lipoferum 4B
Genome accession: NC_016622
Putative virulence/resistance : Resistance
Product : putative ABC transporter, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2820554 - 2821336 bp
Length : 783 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter

DNA sequence : 
ATGTCCAAGGTCCAATCCTCTGCAACGTCGTCCAATTCCATCGCCCGACCCCTCCCCGATTCAATCGGCAACGATTCCAT
CGTGGAACTCGACGACGTCCACTTGAGATTGGACAGCGGTGCCGGGCCCGTCAACATCCTGCGGGGCGTGAATCTTCAGG
TGGCGGCCGGGGAGCGGGTCGGCGTCGTCGGCCCCAGCGGCTCCGGCAAGTCGACCATGATGATGGTGATGGCAGGTCTG
GAACGCCCCAGCGGCGGCACCGTCCGCGTCGCCGGACAGGAACTGAACCGGCTGGACGAGGACGGCTTGGCGCGCTTCCG
CCGCCAGCATGTGGGGATCGTCTTCCAGGCTTTCCATCTGGTCCCGACCATGACGGCGCTGGAGAATGTCGCCATCCCGC
TGGAATTCGCCGGGGTCGCCGACGCCTTCGACCGCGCCCGCATCGGACTGGAGCAGGTCGGCCTGGGCCACCGCATCCAC
CATTATCCCGGCCAGCTTTCGGGCGGCGAGCAGCAGCGCACCGCACTGGCCCGCGCCTTCGTGACCGAGCCGTCGCTGCT
TTTGGCCGACGAGCCGACCGGCAACCTCGACATCGACACCGGCGCCACCATCGTGAAGCTGCTGTTCGATCTGGCCGAAC
GGCGCGGCACCACGCTGGTGCTGATCACCCACGACCCGAGCCTCGCCGCCCGCTGCGACCGGACCGTCCGGCTGGCCGAC
GGCCGCATCGCCGACGACGGGCAGGCGGCACGGCGCGCAAGGCTGCAGGCGGCGGGGGAGTGA

Protein sequence : 
MSKVQSSATSSNSIARPLPDSIGNDSIVELDDVHLRLDSGAGPVNILRGVNLQVAAGERVGVVGPSGSGKSTMMMVMAGL
ERPSGGTVRVAGQELNRLDEDGLARFRRQHVGIVFQAFHLVPTMTALENVAIPLEFAGVADAFDRARIGLEQVGLGHRIH
HYPGQLSGGEQQRTALARAFVTEPSLLLADEPTGNLDIDTGATIVKLLFDLAERRGTTLVLITHDPSLAARCDRTVRLAD
GRIADDGQAARRARLQAAGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZOLI_3000 YP_005040378.1 putative ABC transporter, ATPase component NC_008702.1.4606598. Protein 3e-32 48
AZOLI_3000 YP_005040378.1 putative ABC transporter, ATPase component NC_012469.1.7686878. Protein 9e-35 43