Gene Information

Name : xerD (AZOLI_2940)
Accession : YP_005040323.1
Strain : Azospirillum lipoferum 4B
Genome accession: NC_016622
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2767764 - 2768789 bp
Length : 1026 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10361305, 10635320, 11832210; Product type e : enzyme

DNA sequence :
ATGCCCGGAAAGCCTGCCACCACGATGACCGCTTCCAAAAGTTCCGCCAAGCGGCGGGGCCGGCCGTGCAAGCCGCGCCC
GCTCGCCACCTCCCCGCATCTGGACGCCTTCCTCGACATGCTGACGGCGGAGCGCGGGGCGGCGGTGAACACGCGGCTGG
CCTATGAGCGCGACCTCGCCGATCTCGGCCGCTGGCTCGCCCAGCGCAGCGTGGCGCTGGAGGGGGCCGGCACCGAGGAT
CTGCGCGCCTATCTGGCGGTGCAGAGCAGGGACGGCGCCCCGCGCACGGTGGCACGGCGGCTGTCGGCGATGCGGCAGTT
CTACCGCTTCCTGCTGTCGGAAGGCCGGCGGGTCGACGATCCCGCCTCGCCGCTCGACAGCCCCAAGCAGGGCCGTCCGC
TGCCTAAGATCCTGACGGAGGCGGAGGTCGGAGCCATGCTGTCCACCGCCGAGGCGCGCGGCGGGCCGGAGGGGCTGCGG
CTGGTGGCTTTGCTGGAGGTGCTCTACGCCACCGGCCTGCGCGTGTCGGAACTGGTCGGCCTGCCGATGACCGCCATCAT
GCGCGACGGCCGCGGCCTGCTGGTGCGCGGCAAGGGCGGCAAGGAGCGGATGGTGCCGCTGTCCGACCCGGCGCTGGCGG
CGCTGGCCGCCTATATCCCGCTGCGCGGCCACTTCATTCCGCCCGTTGCCGGAGGGGATGCCGGGCACAGCCCCTTCCTG
TTCCCGTCACGCAGCTCCGGCGAAGGGCACCTGACACGCCAGCGCTTCGCCCAGTTGCTGAAACAGCTAGCCATCGATTC
CGGAATCGACCCCGAGAAGGTCAGCCCGCACGTCCTGCGCCACGCCTTCGCCACCCATCTGCTCGACCATGGCGCCGATT
TGCGCTCGGTCCAGAAGATGCTGGGCCATGCCGACATCGCGACGACGCAGATCTACACCCATGTGGTGACGGAACGGCTG
AAGAAGGTCATGCACGACCACCACCCGCTCGCCCGCCGCAGGGTGGAAGAGCCGTCGGAGGGGTGA

Protein sequence :
MPGKPATTMTASKSSAKRRGRPCKPRPLATSPHLDAFLDMLTAERGAAVNTRLAYERDLADLGRWLAQRSVALEGAGTED
LRAYLAVQSRDGAPRTVARRLSAMRQFYRFLLSEGRRVDDPASPLDSPKQGRPLPKILTEAEVGAMLSTAEARGGPEGLR
LVALLEVLYATGLRVSELVGLPMTAIMRDGRGLLVRGKGGKERMVPLSDPALAALAAYIPLRGHFIPPVAGGDAGHSPFL
FPSRSSGEGHLTRQRFAQLLKQLAIDSGIDPEKVSPHVLRHAFATHLLDHGADLRSVQKMLGHADIATTQIYTHVVTERL
KKVMHDHHPLARRRVEEPSEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-39 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-39 41