Gene Information

Name : hom (AZOLI_1546)
Accession : YP_005039075.1
Strain : Azospirillum lipoferum 4B
Genome accession: NC_016622
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase (HDH)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1472884 - 1474188 bp
Length : 1305 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
ATGTCGAACGCCCAGCAAGCCCCCCTGAAAATCGCCGTCGCCGGCCTCGGTACGGTCGGCGCCGGCGTCCTGAAGCTGCT
GGACGCCCAAGCCTCGCTGATCGAACAGCGCTGCGGCCGCCGGATCGAGGTGGTCGCGGTCAGCGCCCGCTCCAAGGGCA
AGGACCGTGGCGTCGATCTGTCGAAGGTCCAATGGTTCGACGATCCCGTCGCCATGGCGGCCCAGTCCGGCGCCGATCTG
GTGGTGGAACTGATCGGCGGCTCCGAAGGTCCGGCGCGCGACACCGTCGCCACCGCCATCGAGACCGGCAAGCATGTGGT
CACCGCCAACAAGGCCCTGCTGGCGGTTCATGGCACCGAGATCGCCCGGAAGGCCGAGTCCCGCGGCCTGACCGTCGCCT
TCGAGGCGGCGGTGGCCGGCGGCATCCCGATCATCAAGGGGCTGCGCGAAGGTCTGGCAGCCAATGCCGTATCGGAAATC
CACGGCATCCTGAACGGCACCTGCAACTACATCCTGACGGAGATGCGGACCACCGGCCGCGACTTCGCCGATGTGCTGGC
CGATGCCCAGGCCCTCGGCTATGCCGAGGCAGATCCCAGCTTCGACATCGATGGTGTCGATGCCGCGCACAAGCTGGCGA
TCCTCGCCTCGGTCGCCTTCGGAACGCCGGTCGACTTCCCCTCCGTCTACATCGAAGGCATCCGGCAGGTCTCGGCGGTC
GATTTCGACTATGCCGACCAGCTGGGCTTCCGCATCAAGCTGCTGGGCATCGCACGCCGCACCGATGCGGGTGTCGAGCA
GCGGGTGCATCCCTGCATGGTGCCGAAGACCGCCCCCATCGCGTCGGTGGACGGCGTGTTCAACGCCGTGGTGGCCCAGG
CCGATTTCGCCGACCGGGTGCTGTTCGTCGGCCGCGGCGCCGGCTCCGGCCCGACCGCGTCGGCGGTGGTCGCCGACCTG
ATCGACATCGCGCGCGGCCGGTCTACGCCCACCTTCGGCGTTCCGGCCGATCGGCTGGGCGCGGCAACCCCCTCGCCGAT
GGAATCGCGCCGCGGGTCGTACTACGTCCGCCTGATGGTGGTGGACCGCCCCGGTGTGATAGCGGATATCGCAGCGGCGA
TGCGCGACCAGAACGTCTCCATGGAGCAGTTCCTGCAGCGCGGCCGCTCGCCGGGCGAAGGCGTTCCGGTTGTCCTCACC
ACCCATGATACCGACGAGGCGGCCATGCAGCGCGCGCTTGCGACCATCGCGGCCAGCGACAACGTGCTGGAGCCGCCGCG
GATGATCCGGATCGAGCAGTTCTGA

Protein sequence :
MSNAQQAPLKIAVAGLGTVGAGVLKLLDAQASLIEQRCGRRIEVVAVSARSKGKDRGVDLSKVQWFDDPVAMAAQSGADL
VVELIGGSEGPARDTVATAIETGKHVVTANKALLAVHGTEIARKAESRGLTVAFEAAVAGGIPIIKGLREGLAANAVSEI
HGILNGTCNYILTEMRTTGRDFADVLADAQALGYAEADPSFDIDGVDAAHKLAILASVAFGTPVDFPSVYIEGIRQVSAV
DFDYADQLGFRIKLLGIARRTDAGVEQRVHPCMVPKTAPIASVDGVFNAVVAQADFADRVLFVGRGAGSGPTASAVVADL
IDIARGRSTPTFGVPADRLGAATPSPMESRRGSYYVRLMVVDRPGVIADIAAAMRDQNVSMEQFLQRGRSPGEGVPVVLT
THDTDEAAMQRALATIAASDNVLEPPRMIRIEQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 4e-73 49
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 4e-73 49