Gene Information

Name : fliP1 (AZOLI_1489)
Accession : YP_005039023.1
Strain : Azospirillum lipoferum 4B
Genome accession: NC_016622
Putative virulence/resistance : Virulence
Product : flagellar transport protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1408610 - 1409410 bp
Length : 801 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7601828; Product type t : transporter

DNA sequence :
ATGAGGGCGCTCCTCCTCCGCCGTCTGGCGGGCTGCTGGGCGGGCTGCTGGAAACCGCTGTCCGCCGGGCTGCTTCTGGC
GCTCGCCGTCGGGGTCGTCGCCGGCCTCAGCGCCGGCCCGGCCCTGGCGCAGAGCCTGACCTTCGATCTGGGCGACGCCG
GCGGCACCGCCACCGGCCGCATCGTCCAGATGGTGGCGCTGATCACGGTGCTGTCGCTGGCGCCGTCGATCCTGATCATG
ATGACGGCCTTCACCCGCATCGTCATCGTGCTGTCCTTCCTGCGCAACGCGCTGGGCGTGCAGCAGGTGCCGCCGACCAC
GGTGATGATGTCGCTTGCCCTGTTCCTGACCTTCTTCGTCATGGCCCCGGTGTTCGAGCGCAGCTACACCCAGGGCATCC
AGCCGCTGATCAACCAGGAAATCGACGAGATGGAGGCGTTCCGCCGCACGGTGGCGCCGCTGCGCGAGTTCATGCTGAAC
CACACCAGCGAGAAGGATCTGCGGCTGTTCATGGACATGGCCCGCATCCAATCGGTGCCGGAGCCGTCCGACATGCCGCT
GCACGTCCTGGTCCCCGCCTTCATGATCTCGGAGATCAAGCGCGGGTTCGAAATCGGCTTCCTGCTGTTCCTGCCCTTCC
TGATCATCGACATGGTGGTGTCGTCGATCCTGATGTCGATGGGCATGATGATGCTGCCGCCGACCATGGTCGCCATCCCG
TTCAAGATCATCTTCTTCGTGCTGGTCGACGGGTGGTACCTGATCGCCGGATCGCTGGCGCGCAGTTTCGGCACGCTTTG
A

Protein sequence :
MRALLLRRLAGCWAGCWKPLSAGLLLALAVGVVAGLSAGPALAQSLTFDLGDAGGTATGRIVQMVALITVLSLAPSILIM
MTAFTRIVIVLSFLRNALGVQQVPPTTVMMSLALFLTFFVMAPVFERSYTQGIQPLINQEIDEMEAFRRTVAPLREFMLN
HTSEKDLRLFMDMARIQSVPEPSDMPLHVLVPAFMISEIKRGFEIGFLLFLPFLIIDMVVSSILMSMGMMMLPPTMVAIP
FKIIFFVLVDGWYLIAGSLARSFGTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 4e-15 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 6e-15 41
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 5e-15 41
lscR AAO18040.1 LscR Virulence TTSS locus Protein 3e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP1 YP_005039023.1 flagellar transport protein FliP VFG2494 Protein 2e-37 53
fliP1 YP_005039023.1 flagellar transport protein FliP VFG1259 Protein 2e-35 53
fliP1 YP_005039023.1 flagellar transport protein FliP VFG2338 Protein 4e-35 52
fliP1 YP_005039023.1 flagellar transport protein FliP VFG2016 Protein 2e-31 50
fliP1 YP_005039023.1 flagellar transport protein FliP VFG0044 Protein 6e-16 43
fliP1 YP_005039023.1 flagellar transport protein FliP VFG0394 Protein 5e-16 42
fliP1 YP_005039023.1 flagellar transport protein FliP VFG0188 Protein 2e-16 41