Gene Information

Name : clpA (BLBCPU_550)
Accession : YP_005037658.1
Strain : Blattabacterium sp. Cpu
Genome accession: NC_016621
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease, ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.21.92
Position : 558247 - 560364 bp
Length : 2118 bp
Strand : -
Note : COG0542O

DNA sequence :
ATGAATCATTATAGATTTTTTTTTTATTCTACTTATTATTTAGATGAAAATATTGAAAATGATATTTCCTCTTCTTATTA
TGGAGGATTTGGAGGAATTAGAACGGGATCTGGTTATTACAACAACAATAACAATAATAGAGGAACTTCTTCTATAAAAA
TAAATACTCCAATATTGGATAATTTTGGAATTGATCTAAATTCTATTGCTATTAATGGTAAATTAGATCCAGTAGTAGGA
AGAGAAAAGGAAATTGAACGAGTATCTCAAATATTGAGCAGGAGAAAAAAAAATAATCCTCTACTTATAGGAGAACCCGG
TGTAGGAAAATCTTCTATTGCCGAGGGCTTAGCTTTACGTATTGTACAAAAAAAAATTTCCAGAGTATTATATAATAAAA
GAGTAGTTGTTTTAGACTTAGCAATTTTAGTTTCTGGAACTAAATATAGAGGTCAATTTGAAGAAAGAATGAAAACTATT
ATAAATGAGTCAGAAAAAGATACAAATTTAATTCTTTTTATAGATGAAATTCATACAATGATTGGAGCAGGAGGAACAAC
TGGTTCATTAGATGCTTCTAATATATTTAAACCAGCTTTAGCTAGAGGATCTATTCAATGTATTGGAGCAACTACATTAA
ATGAATATAGACAATATATAGAAAAAGATGGAGCATTAGAACGTAGATTTCAAAAAATTATAGTACCACCTTCTTCTGAA
GAAGAAACTATTGAAATTTTAAAAAAAATAAAAGAAAAATATGAAAATCATCATAATGTAATTTATACAGAAGAATCTAT
AAAAGCTTGTGTAAATTTAACTGTACGATATATTGTAGATCGTTATTTACCAGATAAAGCTATTGATGCACTTGATGAAG
CTGGATCTCGTGTCCATATTAAAAATATTAAAGTTCCCCAAGAAATAATTTTTTTGGAAAAGGAATTGGAAAATATTCGG
AAAAAAAAATTGAAAGTAGTTAAGTGCCAAAAATATGAAGAAGCAGCGCATTTACGTGATATGGAAAAACGTATAGAAAA
ACAATTGATAAAAGCACAACAATCATGGGAAAATTTATCCAAAGAAAATAAAGAAATAGTTTCTGAAGAAAACGTAGAAG
AAGTAGTTTCCATGATGAGTGGAGTTCCAGTAAATAGGATAGCTCAAGCGGAAATGAAAAAATTGAATAAAATGACAAGT
ATTCTAAAAGAAAAAATAATAGGACAAGATGAAGCTATAGAAAAAATAGTGAAAGCAGTTAAAAGAAATAGAACAGGATT
AAAAGATCCTAATTGCCCTATAGGATCTTTTATTTTTTTTGGAAAAACAGGTGTTGGAAAAACTTATTTGGCAAAAATAT
TTGCAAAAGAACTTTTTGATTCAGAGGAATCATTAGTACGTATCGATATGAGTGAATATATGGAAAAATTTTCTATTTCT
AGATTAATAGGAGCTCCTCCTGGTTATGTAGGATACGAAGAAGGAGGGCAGTTAACAGAAATTATTCGTCGTAAACCTTA
TTCTGTTATTTTATTAGATGAAATAGAAAAAGCTCATCATGAAGTATTTAATGTTTTATTACAAATACTTGATTATGGAT
GTATAACTGATAGTTTTGGAAGAAAAGTAAATTTTAAAAATTCTGTAATTATTTTTACCTCAAATACGGATACTCAAAAA
TTAAGAGAATTTGGTCAAGAAATAGGTTTTTATACTAAATCAAAAAAATCAAATGATTATAAAAATATTTTAGAAAAAAC
TTTGAAACGTATTTTTTCTACAGAATTTATAAATAGAATAGATGATATTATCATTTTTAATACTCTTAACCAAGAAGATA
TATATAAAATAACTCATATAGAATTAGAAAAAATAAGTATTCATATGTCTTATTTAGGATATAAATTAATTTTATTTCCA
GAAGTAAAAGATTTTATTCAGAAAAAGGGATTTAACCAAGAATATGGAGTCCGTTCATTAAAAAGAATAATAGAAAAATT
TATAAAAAATCCTATATCGGAATGTATTATTAGTGAAACCTTAAAAAAAGGAGATCAAATAACACTTCAAATGAACGATA
AAATGAATGAGATTAACATCTCTATTCAAAAGCAATAA

Protein sequence :
MNHYRFFFYSTYYLDENIENDISSSYYGGFGGIRTGSGYYNNNNNNRGTSSIKINTPILDNFGIDLNSIAINGKLDPVVG
REKEIERVSQILSRRKKNNPLLIGEPGVGKSSIAEGLALRIVQKKISRVLYNKRVVVLDLAILVSGTKYRGQFEERMKTI
INESEKDTNLILFIDEIHTMIGAGGTTGSLDASNIFKPALARGSIQCIGATTLNEYRQYIEKDGALERRFQKIIVPPSSE
EETIEILKKIKEKYENHHNVIYTEESIKACVNLTVRYIVDRYLPDKAIDALDEAGSRVHIKNIKVPQEIIFLEKELENIR
KKKLKVVKCQKYEEAAHLRDMEKRIEKQLIKAQQSWENLSKENKEIVSEENVEEVVSMMSGVPVNRIAQAEMKKLNKMTS
ILKEKIIGQDEAIEKIVKAVKRNRTGLKDPNCPIGSFIFFGKTGVGKTYLAKIFAKELFDSEESLVRIDMSEYMEKFSIS
RLIGAPPGYVGYEEGGQLTEIIRRKPYSVILLDEIEKAHHEVFNVLLQILDYGCITDSFGRKVNFKNSVIIFTSNTDTQK
LREFGQEIGFYTKSKKSNDYKNILEKTLKRIFSTEFINRIDDIIIFNTLNQEDIYKITHIELEKISIHMSYLGYKLILFP
EVKDFIQKKGFNQEYGVRSLKRIIEKFIKNPISECIISETLKKGDQITLQMNDKMNEINISIQKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-131 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpA YP_005037658.1 ATP-dependent Clp protease, ATP-binding subunit VFG0079 Protein 6e-145 51
clpA YP_005037658.1 ATP-dependent Clp protease, ATP-binding subunit VFG0080 Protein 2e-120 47