Gene Information

Name : iucD (BMS_0525)
Accession : YP_005034408.1
Strain : Bacteriovorax marinus SJ
Genome accession: NC_016620
Putative virulence/resistance : Virulence
Product : putative siderophore biosynthesis protein IucD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 545140 - 546423 bp
Length : 1284 bp
Strand : -
Note : -

DNA sequence :
ATGAGTACTGAGAAAATTTACGATTTAATTGGCATCGGAGTGGGGCCTTTTAATTTAAGTCTAGCAGCGCACTCCTCTCA
AGTAGATAAAGTCGATAGTCTATTTCTTGAGCAGAAACCATCATTTGAGTGGCATAGAGAACTTATTTTTCAAGATTCTT
ATATGCAGACATCATTTTTAAAAGACCTCGTAACTGGTTCCGACCCTACGAATCCATATACATTTTTAAACTACCTAGTT
AAGAATGGTCTCTTCTACTCCTTTATGAATACAGGAAGAAAGAGTATTACGAGAAAGGAATTCGAAGTCTACTGTCGTTG
GGTTGCCGAATCCCTTGGAGACAAAATTGCCTTCGGTAATAAAGTGAATAATATTACTCATAAGAATAACCTCTTCGTAA
TTGAAACAAATAAGGCCGTCTTCACTGCTAAGAATATATGCCTTGGTACTGGTTTAATACCAAGTGTTCCAAAGTGTGCC
AGAGACTTTATCGGTGATGAAGTATTCCATGCTAAATCAAAACAACTCGCCACTGTAAATCTTGAAGGAAAGAATCTCGT
TGTTGTTGGCGGAGGCCAGACAGGTGTTGAAGTCTTTAGAAATGCTCTCAATGAGAAATGGGGACGACCAAACTCAATCA
AACTCATTACAACAAGGGCAAATTTAGAACCCCTTGAAGCATCTCCTTTTACAGATGAATACTTCACTCCAGGGTACGTT
AAGCAATTCTTCTCACTTAAAAATGATAAGAAAGAGAGCATTGTGAACTATCAACTTCTGGCAAGTGATGGAAATACTCC
TGAATACCTAGAAGAGTTATATAACGAGCTCTACCTAGTTAAGAATATTCACCGCGACGAAAGAAAGATCGAAATCCTGC
CATATCGCTGGTTGGATAAAGTTGAGAAAGGGGAAAACTCTTATCAACTAACTTATAGAAATGACTTCAGAGATAGACTT
GAGAGCGATGAAGCAGATGTGATTATATTGGCCACAGGGTTTCAAAAGAGAACTCCGCCAATACTCGACTTATTAGAAGA
ACATATTCCACTGTGTGAGAAAGGTCGTTTTATCTTTAATAAGGACTACTCTCTTAAGTGGGATGGTGAAGAGACCAATA
AAATTTTCGCCTTCAACTTTAGTCGTTATGGTCATGGAATCTCAGAGCCACAATTAAGTTTAATGGCATGGAGATCCGCC
AACGTGATCAATTCTCTTTGTGAAGAAGAAGTCTATCCAACAAATAGCTTCAAACCAAACTTCATCGACTATGGAGAGGA
ATAG

Protein sequence :
MSTEKIYDLIGIGVGPFNLSLAAHSSQVDKVDSLFLEQKPSFEWHRELIFQDSYMQTSFLKDLVTGSDPTNPYTFLNYLV
KNGLFYSFMNTGRKSITRKEFEVYCRWVAESLGDKIAFGNKVNNITHKNNLFVIETNKAVFTAKNICLGTGLIPSVPKCA
RDFIGDEVFHAKSKQLATVNLEGKNLVVVGGGQTGVEVFRNALNEKWGRPNSIKLITTRANLEPLEASPFTDEYFTPGYV
KQFFSLKNDKKESIVNYQLLASDGNTPEYLEELYNELYLVKNIHRDERKIEILPYRWLDKVEKGENSYQLTYRNDFRDRL
ESDEADVIILATGFQKRTPPILDLLEEHIPLCEKGRFIFNKDYSLKWDGEETNKIFAFNFSRYGHGISEPQLSLMAWRSA
NVINSLCEEEVYPTNSFKPNFIDYGEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 4e-70 41
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 4e-70 41
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 4e-70 41
iucD AAK71634.1 IucD Virulence SHI-3 Protein 5e-70 41
iucD AAD44749.1 IucD Virulence SHI-2 Protein 3e-70 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iucD YP_005034408.1 putative siderophore biosynthesis protein IucD VFG0937 Protein 2e-70 41
iucD YP_005034408.1 putative siderophore biosynthesis protein IucD VFG1084 Protein 3e-70 41
iucD YP_005034408.1 putative siderophore biosynthesis protein IucD VFG0618 Protein 2e-70 41