Gene Information

Name : BMS_0344 (BMS_0344)
Accession : YP_005034238.1
Strain : Bacteriovorax marinus SJ
Genome accession: NC_016620
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP mannose dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 360287 - 361567 bp
Length : 1281 bp
Strand : +
Note : -

DNA sequence : 
GTGATGCGTAAAGTTTCCGTTATTGGTTTAGGTTATGTTGGTTTCCCCGTGGCTGTTGCTTTTAGTCGTTTTGGGCAAGT
TATTGGATTTGATATTAATGAAACTCGGCTTAAAGAGTTGAGGGCTGGATTTGATAGTACTAAAGAGCTGACGTCTAAAG
AGTTAGAAAGTTTAAATATTAAGTATACTTCTGATGTGAATGAGATTTCTGAAGCAAATTTTCATATTATTGCTGTACCT
ACTCCTGTAAATAAGGCTAAGCAGCCTGATCTGTCTCCTTTGATATCTGCCTCCAACCTAGTTGGTGGAGTTTTGAAGGC
TGGAGATATTGTCGTTTATGAATCAACGGTTTATCCAGGAGCAACTGAGGAAGACTGTATTCCCGTTCTTGAGAAGGCAT
CTGGATTAAAAGCTGGACATGATTTCAAAGTAGGGTATAGCCCTGAGAGGATAAACCCCGGAGATAAGAAGCATACCCTT
GAATCTATTGTTAAGGTTGTTTCTGCACAGGATAGAGACTCATTAAAGGTTCTTTCTGAAATGTATTCCAAAGTAGTAAG
TGCAGGTGTTTATGAGGCAAGTTCGATAAAAGTGGCAGAAGCGGCTAAGGTGATTGAGAATTCTCAGAGAGATATAAATA
TTGCATTTGTTAATGAGTTGGCTATTATTTTTGAAAAAATGGGTATTAACACTCTAGATGTTTTAGAGGCTGCAGGAACA
AAATGGAACTTTTTGAACTTTAGGCCTGGCCTTGTCGGTGGCCACTGTATAGGAGTTGATCCTTATTATCTTACTCATAA
GGCTGAGCAGCTGGGGTTACACCCTGAGATAATTCTTTCGGGAAGGAGGATCAATGATAGTGTGGGGAAGTTTGTTGCAG
AAAAAGTTGTTAAACAACTTATTCATGCGGGAGTTCCCATTAAGAATTCTCTTGTGACAATCCTAGGGTTGACCTTTAAG
GAGGATTGCCCTGATTTGAGAAATACTAGGGTTGTAGATATTATTGACGAGCTGAGGGATTATGGAGTGAAGATACAGGT
GCATGATCCTGAGTGTTATGTTGATGAAGCTTTTCGGCTTTATAAAACTCCTGTCGTGAGCAAAGAGCAACTTTCTGAAT
CTAATGCTCTTATTGTTGCAGTGGCTCACTCTGAATATACAAAGTGGCAGAGACTGGACATTGAAAAGCTTGCTGGGAAT
AGTGGTATTATTTTGGACTTAAAAGGTGTTTGGAGGAATAGTACTATTTCTACTTCTTTTGAAAACTATTGGAACTTGTA
A

Protein sequence : 
MMRKVSVIGLGYVGFPVAVAFSRFGQVIGFDINETRLKELRAGFDSTKELTSKELESLNIKYTSDVNEISEANFHIIAVP
TPVNKAKQPDLSPLISASNLVGGVLKAGDIVVYESTVYPGATEEDCIPVLEKASGLKAGHDFKVGYSPERINPGDKKHTL
ESIVKVVSAQDRDSLKVLSEMYSKVVSAGVYEASSIKVAEAAKVIENSQRDINIAFVNELAIIFEKMGINTLDVLEAAGT
KWNFLNFRPGLVGGHCIGVDPYYLTHKAEQLGLHPEIILSGRRINDSVGKFVAEKVVKQLIHAGVPIKNSLVTILGLTFK
EDCPDLRNTRVVDIIDELRDYGVKIQVHDPECYVDEAFRLYKTPVVSKEQLSESNALIVAVAHSEYTKWQRLDIEKLAGN
SGIILDLKGVWRNSTISTSFENYWNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-119 56
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 9e-103 55
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 9e-103 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BMS_0344 YP_005034238.1 UDP-glucose/GDP mannose dehydrogenase VFG0431 Protein 4e-103 55