Gene Information

Name : lpdA (BMS_2256)
Accession : YP_005036019.1
Strain : Bacteriovorax marinus SJ
Genome accession: NC_016620
Putative virulence/resistance : Unknown
Product : putative dihydrolipoamide dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2282562 - 2283962 bp
Length : 1401 bp
Strand : -
Note : -

DNA sequence :
ATGAGTGAATATGATGTAGTAGTTATCGGTTCTGGTCCTGGTGGATATGTTTGTGCTATTAGAATGGCGCAACTTGGTTT
TAAAACAGCGATAGTTGAAAAATATCCAACTCTAGGTGGGACTTGTTTAAACGTAGGGTGTATCCCTTCTAAAGCATGGT
TAGAGTCTTCAGAGAGATTCTATGATGCTTCTCACCACTTTGCTGATCACGGTATTGAAACAGGTAAGGTCAAAGTTGAT
ATTTCTAAAATGAGCGCTAGAGTACAGAAAGTTGTCTCTGACACTTGTGGAGGAATTGATTTTCTTATGAAGAAGAATAA
GATTGAAGTTCTTCGTGGAGTGGGAAGTCTTAAAGATAAGAATACGGTTGTTGTAAAAGGTGAGAAAGAAATAGAAGTTA
AGGCAAAGAATATTGTTCTTGCTACTGGTTCTAAGCCTTCGACTCTACCTTTTATTAAGCTTGATAAAGAAAGAGTTATT
ACTTCAACTGAGGCCCTAAAGTTAGAGGAAGTTCCAAAGCACCTTGTAGTTATTGGTGGTGGAGTTATTGGCCTTGAAAT
GGGACAAGTATTTCTACGCCTTGGAGCAAAGGTTTCTGTTGTTGAGTATGCAGACTCAATGATTGCGGCTATGGATTCTG
AGTTAGGAAAGAATTTACAGAGAGTTCTTAAGAAGCAGGGGATGGAGTTCTATGCTGGTCATGGAGTAACTTCTGTTGAG
AGAAAAGGAAAGAAAGTCACAGTTGTGGCCAAGAAGAATAAAGACGGTAAAGAAGTAAAGATCGAAAGTGATTATTGCCT
CGTTGCCGTAGGAAGAAGGCCATTCACTGATGGACTTGGGCTTGAGAATGCTGGAGTTCAAGTAGATGAGAGAGGGGTTG
TTGTAACCGATCATAATTTACAGACAAGTGTCCCTAATATCTACGCTATCGGAGATATTGTTAAAGGGCCAATGCTTGCA
CATAAGGCCGAAGAAGAGGGTGTCTATGTTGCCGAGTTATTAGCAGGTCAAAAACCTCACTTGAATTATAATCTTATTCC
TGGTGTTGTTTACACTTGGCCAGAAGTTTCTTCTGTTGGACAGACTGAAGAGCAGCTCAAGGCTTCAAAGGTTCCTTACA
AGAAAGGTTCTTTCCCATTTAAGGCCTCTGGTAGAGCAAGAGCAGGTAATGAGTCTGACGGGCTTATTAAAGTCTTGGCC
CATAAAGATACAGATGAAATACTTGGTGTCCATATGATTGGCCCAAGGTGTGCTGATCTAATTGGTGAAGCCGTTGTGGC
CATGGAGTTTAGGGCATCTGCTGAGGATATTGCGAGAATTTGTCACGGTCATCCTACTTACACAGAGAGTTTTAAAGAAG
CATGTCTTGCAGCTACTGAAGATAGAGCGATCCATATCTAA

Protein sequence :
MSEYDVVVIGSGPGGYVCAIRMAQLGFKTAIVEKYPTLGGTCLNVGCIPSKAWLESSERFYDASHHFADHGIETGKVKVD
ISKMSARVQKVVSDTCGGIDFLMKKNKIEVLRGVGSLKDKNTVVVKGEKEIEVKAKNIVLATGSKPSTLPFIKLDKERVI
TSTEALKLEEVPKHLVVIGGGVIGLEMGQVFLRLGAKVSVVEYADSMIAAMDSELGKNLQRVLKKQGMEFYAGHGVTSVE
RKGKKVTVVAKKNKDGKEVKIESDYCLVAVGRRPFTDGLGLENAGVQVDERGVVVTDHNLQTSVPNIYAIGDIVKGPMLA
HKAEEEGVYVAELLAGQKPHLNYNLIPGVVYTWPEVSSVGQTEEQLKASKVPYKKGSFPFKASGRARAGNESDGLIKVLA
HKDTDEILGVHMIGPRCADLIGEAVVAMEFRASAEDIARICHGHPTYTESFKEACLAATEDRAIHI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 2e-65 42