Gene Information

Name : dppD1 (AZOBR_p210185)
Accession : YP_005033040.1
Strain :
Genome accession: NC_016618
Putative virulence/resistance : Unknown
Product : dipeptide ABC transporter, ATP-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 180898 - 182562 bp
Length : 1665 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7536291; Product type t : transporter

DNA sequence :
ATGACCGAGACGCCTCTCCTCGACGTCCGCAACCTGACCATCGACCTGCCGCGCGGCGCCGACCGCCCGCACGCGGTCCA
GGACCTGACCTTCACGCTGGAGCACGGTGAAATCCTCTGCGTGGTCGGCGAGTCCGGGTCGGGCAAGTCGATGACCGCGC
ACGCCGTGATGGGTCTGTTGCCCAAGGCGGTGACGGTGTCGTCGGGCGAAATCCGCCACCAGGGCACCAACGTGTTCAGC
CTGCCGGAGCGCGACCAGCGCGCGCTCCGCGGCGGCCGCATCGCCATGATCTTCCAGGAGCCGATGACGGCGCTGAACCC
GCTGATGCGGGTCGGCGACCAGATCGACGAGGTTCTGCGCTACCACACCACGCTCGACCGCGCCGCCCGCCGGGCGCGCG
TGGTGGAGCTTCTCGCCTCGGTCGGCCTGCCGGAGCCGGACCATCTGCGCCGCAGCTACCCGTTCCGCCTGTCGGGTGGC
CAGCGCCAGCGCGTGATGATCGCCATGGCGCTGGCGGTCGAGCCGGACATCCTGATCGCCGACGAGCCGACGACCGCGCT
CGACGTCACCACCCAGAAGCAGATCCTGGAGCTGATCCAGGACATCCAGGCCAAGCGCCGCATGGGCGTGATGTTCATCA
CCCACGACTTCGGCGTGGTGGCGGAGATCGCCCACCGCGTGGCGGTGATGCAGCGCGGCCAGATCGTCGAGATCGGCACC
GCCGAGGAGGTCCTGAACCGTCCGAAGCACCCCTACACCCGCCAGCTCATCGCCGCCGTCCCGCACCTGATCGAGCACCG
CGAGGATTTCACCCGCGCCCGCCAGCCGGTGCTGACGGCGGAGAAGGTGTGCAAGACCTTCCACATCGGCGGCGGCTTCT
TCACGCCGGGGCGCAAGGTGGTGGCGGGCGACGACCTGTCGCTGACCATCCACCAGGGCGAGACGGTCGGTCTGGTCGGC
GAATCCGGCTCCGGCAAGTCCACCCTGGGCCGCTCCATCGTCGGGCTGATCAAGCCCGATTCGGGCAGGATCCTGTTCGA
GGGCGTCGATCTGCTGTCGCTGTCGCGACCGGCCTTCCGGCCCTACCGGCGGCACGTGCAGATGGTCTTCCAGGCCCCCT
ACGCCTCGCTGAACCCGCGCCACACCGTGGGCGACATCATCACCCAGGGGCCGGTGGCCTTCGGCGAGGACCGCCACAAG
GCGCTTGAGAAGGCGAAGGCGCTGCTCAAACTCGTCGGGCTCGACGCCTCGGCGGCGGAACGCTTCCCGCATGAGTTCTC
CGGCGGGCAGCGCCAGCGCATCTCCATCGCCCGCGCCCTGGCGCTGGAGCCGAAGCTGCTGATCGCCGACGAGCCGGTGT
CGGCGCTCGACGTGTCGGTGCAGGCGCAGGTGCTCGACCTGCTGGAGGATCTGCGGCACCGGCTGAACCTGTCGATGCTG
TTCATCACCCACGACCTGCGCATCGCCGCCCAGATCTGCGACACCATCGCGGTCATGCAGAAAGGCCGCATCGTCGAGAT
CGGCCCGGCGAAGGAGGTGTTCGGCAACCCGCAGCACGCCTACACCCGCACCCTGCTGGACGCCATCCCCGGCAAGGGCT
GGACCATCCCGGAGGACGTGGTTCCGGTGACGCGGCGGTCAGCCGCCCTGCGCAACAGCGCCTGA

Protein sequence :
MTETPLLDVRNLTIDLPRGADRPHAVQDLTFTLEHGEILCVVGESGSGKSMTAHAVMGLLPKAVTVSSGEIRHQGTNVFS
LPERDQRALRGGRIAMIFQEPMTALNPLMRVGDQIDEVLRYHTTLDRAARRARVVELLASVGLPEPDHLRRSYPFRLSGG
QRQRVMIAMALAVEPDILIADEPTTALDVTTQKQILELIQDIQAKRRMGVMFITHDFGVVAEIAHRVAVMQRGQIVEIGT
AEEVLNRPKHPYTRQLIAAVPHLIEHREDFTRARQPVLTAEKVCKTFHIGGGFFTPGRKVVAGDDLSLTIHQGETVGLVG
ESGSGKSTLGRSIVGLIKPDSGRILFEGVDLLSLSRPAFRPYRRHVQMVFQAPYASLNPRHTVGDIITQGPVAFGEDRHK
ALEKAKALLKLVGLDASAAERFPHEFSGGQRQRISIARALALEPKLLIADEPVSALDVSVQAQVLDLLEDLRHRLNLSML
FITHDLRIAAQICDTIAVMQKGRIVEIGPAKEVFGNPQHAYTRTLLDAIPGKGWTIPEDVVPVTRRSAALRNSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-90 46
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-90 46
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-90 46
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-90 46
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-97 41