Gene Information

Name : kdsB (AZOBR_40271)
Accession : YP_005030569.1
Strain : Azospirillum brasilense Sp245
Genome accession: NC_016617
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 814878 - 815591 bp
Length : 714 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3023327; Product type e : enzyme

DNA sequence :
ATGGCCTCCACCCGCCTGCCGGGCAAGCCGCTGGCCGACATCGGCGGGGCGCCGATGATCGTGCAGGTGTGGCGCCGCGC
CATGGAGGCAGAGATCGGCCCGGTGGTGGTCGCCTGCGCCGAGCCGGAGATCGCCGCGGCGGTGGAGGCGGCGGGCGGGA
CCGCCGTGCTGACCCGGCCCGACCATCCCTCGGGCTCCGACCGCATCTTCGAGGCGGTCGGCCTGCTCGACCCGGAGGGG
AAATACGACGCGGTGGTGAACGTGCAGGGCGACCTGCCGACCATCGAGCCCGCCGTGGTCCGCGCCGCCTTCGCCCCGCT
GTCCGACCCGCAGGTGGACATCGCCACCCTGGTGGTCGAGATCACGCGGGAGGAGGAGCGCACCGACCCCAACGTGGTGA
AGGCCGTCCTGGAGCTGCCGCCCGGCGCCCGGCGGGGCCGCGCCCTCTATTTCAGCCGCGCCACCGCGCCCTGGGGCGAC
GGGCCGCTGTTCCACCACATCGGGCTCTACGCCTACCGCCGCGCGGCGCTGGAGCGCTACGTCCGGCTGCCGCCCTCGGC
GCTGGAGCAGCGGGAGCGGCTGGAGCAGTTGCGCGCCCTGGCCTTCGGGATGCGCATCGACGCCGCCGTCGTTGACGCGG
TTCCGCTCGGCGTCGATACTCCCGCCGACCTGGAGCGCGCCCGCGCGATCCTCGCCAAGCGCACCTCCCTTTAA

Protein sequence :
MASTRLPGKPLADIGGAPMIVQVWRRAMEAEIGPVVVACAEPEIAAAVEAAGGTAVLTRPDHPSGSDRIFEAVGLLDPEG
KYDAVVNVQGDLPTIEPAVVRAAFAPLSDPQVDIATLVVEITREEERTDPNVVKAVLELPPGARRGRALYFSRATAPWGD
GPLFHHIGLYAYRRAALERYVRLPPSALEQRERLEQLRALAFGMRIDAAVVDAVPLGVDTPADLERARAILAKRTSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-24 43
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 1e-24 43
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 3e-25 43