Gene Information

Name : AZOBR_40257 (AZOBR_40257)
Accession : YP_005030555.1
Strain : Azospirillum brasilense Sp245
Genome accession: NC_016617
Putative virulence/resistance : Unknown
Product : oligopeptide ABC transporter, ATP-binding components
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 801667 - 803307 bp
Length : 1641 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter

DNA sequence :
ATGGAAACCATGACCGACAGCAATGATCTCCTCCAGGTCCGCAACCTCCATGTCGAGTTCCGCTCGGGCGGCGGGGCGAT
GCACGCGGTGAAGGGTGTGTCCTTCGACATCGCCAAGGGGGAGACCCTGGCGCTGGTCGGCGAGTCCGGATCGGGCAAGT
CGGTCACCGCCCTGTCGATCCTGCAACTGCTGCCCTACCCCATGGCGCGCCACCCGCATGGCTCCATCCGCTTCCGCGGG
ACCGAGCTGGTGGGGGCGGAGGAGAAGGTGCTGCGCGACGTGCGCGGCGACCGCATCGCCATGATCTTCCAGGAACCCAT
GACCTCGCTGAACCCGCTGCACAGCATCGAGCGGCAGATCAACGAGACGCTGTTCCTGCACAAGGGCCTGTCCCGCGCCG
CCGCGCGCAAGCGCACGCTGGAGCTGCTGCGGCTGGTCGGGCTGCCCAACCCGGAAAAGCGGCTGAACGCCTACCCGCAC
GAGCTGTCGGGCGGCCAGCGCCAGCGCGTGATGATCGCCATGGCGCTCGCCAACGAGCCGGACCTGCTGATCGCCGACGA
GCCGACCACCGCGCTGGACGTCACCATCCAGGCGCAGATCCTGGAGTTGCTGAAGGACCTCCAGCGCCGCTTCGGCATGG
CGCTGCTGCTCATCACCCACGACCTGGGCGTGGTGCGCAAGATGGCCGACCGGGTCTGCGTGATGAACCAGGGGGAGATC
GTCGAGCAGGCCGACGTCGCCGACATCTTCGCCCGCCCGCAGCACGCCTACACGCGCAAGCTCCTGGCCGCCGAGCCGAA
GGGCGACCCGCTGACCCCTCCCGCCGACGCGCCGGAAGTCATGGCCGCCGACAACCTCAAGGTCTGGTTCCCCATCAAGA
AGGGGCTGCTGCGCCGCACCGTCGATCACGTCCGCGCCGTGGACGGCGTGTCGGTCAACGTGCGGCAGGGGCACACGGTC
GGGGTGGTCGGCGAGTCCGGTTCCGGCAAGACGACGCTGGGGCTGGCCCTGCTGCGCCTGCACGCCAGCGAGGGGGCGAT
CCGCTTCGACGGCAAGGACATCCAAGGCTGGCAGGCCAAGAAGCTGCGCGGGCTGCGGCGGGAGATGCAGGTGGTCTTCC
AGGACCCCTACGGCAGCCTGTCGCCCCGCCTGTCGGTCGGCCAGATCATCGGCGAGGGGCTGACGATCCACGGCATCGGC
TCCGGCGCCGAGCGCGACGCCATGGTGGCGAAGGCGCTGGAGGAGGTGGGGCTCGACCCGTCCAGCCGCCACCGCTACCC
GCACGAGTTCTCCGGCGGCCAGCGCCAGCGCATCGCCATTGCCCGCGCCCTGGTGCTGAAGCCGAAATTCGTGGTGCTGG
ACGAGCCGACCAGCGCGCTCGACATGTCGGTGCAGGCGCAGATCGTCGACCTGCTGCGCGACATCCAGGCGCGCAACAAC
CTCGCCTACCTCTTCATCAGCCACGACCTGCGGGTGGTGCGGGCGCTCAGCAGCCACGTCATCGTCATGAAGGACGGCAA
GGTGGTGGAGCAGGGCCCCACCCGCCGCATCTTCGAGGAGCCGCGCGAGGAATACACCCGCGCCCTGCTCGCCGCCGCGC
TGAACCTGGAAGCCGTCAAGTCCGACGCCGTGCGGATGTAG

Protein sequence :
METMTDSNDLLQVRNLHVEFRSGGGAMHAVKGVSFDIAKGETLALVGESGSGKSVTALSILQLLPYPMARHPHGSIRFRG
TELVGAEEKVLRDVRGDRIAMIFQEPMTSLNPLHSIERQINETLFLHKGLSRAAARKRTLELLRLVGLPNPEKRLNAYPH
ELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTIQAQILELLKDLQRRFGMALLLITHDLGVVRKMADRVCVMNQGEI
VEQADVADIFARPQHAYTRKLLAAEPKGDPLTPPADAPEVMAADNLKVWFPIKKGLLRRTVDHVRAVDGVSVNVRQGHTV
GVVGESGSGKTTLGLALLRLHASEGAIRFDGKDIQGWQAKKLRGLRREMQVVFQDPYGSLSPRLSVGQIIGEGLTIHGIG
SGAERDAMVAKALEEVGLDPSSRHRYPHEFSGGQRQRIAIARALVLKPKFVVLDEPTSALDMSVQAQIVDLLRDIQARNN
LAYLFISHDLRVVRALSSHVIVMKDGKVVEQGPTRRIFEEPREEYTRALLAAALNLEAVKSDAVRM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-83 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-83 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-83 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-83 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-101 43