Gene Information

Name : xerD (AZOBR_40126)
Accession : YP_005030428.1
Strain : Azospirillum brasilense Sp245
Genome accession: NC_016617
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 687664 - 688683 bp
Length : 1020 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10361305, 10635320, 11832210; Product type e : enzyme

DNA sequence :
ATGAGTCCCATGCCCAAAACACCCCTGCCGAAAGCCCAGCCGAAGCGGCGCGGGCGCCCCTGCAAACCGCGCCCGATCGC
GGCCTCGCCCCATGTCGACGCCTTCCTGGACATGCTGACGGCGGAGCGCGGCGCGGCGCTGAACACCCGGATGGCCTACG
AGCGCGACCTCGCCGATCTCGCCCTCTGGCTGGCCCAGCGCGGGCAGCCGCTGGAAAAGGCGGTGACGGAGGATCTGCGC
GCCTACCTCGCCTTCCAGTATGTGGAGGGCGGGCAGAAGCCGGCGCCGCGCACGCTGGCCCGCCGCCTGTCGGCGATGCG
CCAGTTCTACCGCTTCCTGGTCTCGGAAGGCCGGCGGGCCGACGACCCGGCTTCGGCGCTCGACAGCCCCAAGCAGGGCC
GCCCGCTGCCCAAGATCCTGACGGTGGAGGAGGTCACGCGCATGATCGACTCCGCCCAGACCCGCGGCGGGCCGGAAGGG
CTGCGGCTGGTCGCGCTGCTGGAGGTGCTCTACGCCACCGGCCTGCGCGTGTCGGAGCTGGTCGGCCTGCCGATGGCGGC
CATCCTGCGCGACGGGCGCGGGCTGATCGTGCGCGGCAAGGGCGGGAAGGAGCGCATGGTGCCGCTGTCCGAACCGGCCT
CCGCTGCGCTGAACGTCTATCTGCCCTGGCGGAGCCACTTCATTTTGGCCGGGCGGGAGAACGGACCGGTCGCCTTCCTG
TTCCCGTCGCGCAGCTCCACCAACGGGCACCTGACGCGCCAGCGGTTCGCCCAGCTTCTGAAGGAGCTGGCCATCGAGTC
GAACATCGACCCGGAGAAGGTCAGCCCCCACGTGCTGCGCCACGCCTTCGCCACCCACCTGCTCGACCGCGGGGCGGACC
TGCGGTCGGTCCAGAAGATGCTGGGCCACGCCGACATCGCCACCACCCAGATCTACACCCATGTGGTGTCGGAGCGGCTG
AAACAGGTCGTGCACGAGCATCACCCGCTGGCCCGGCGAAAAACCATTCGTACGCAATAG

Protein sequence :
MSPMPKTPLPKAQPKRRGRPCKPRPIAASPHVDAFLDMLTAERGAALNTRMAYERDLADLALWLAQRGQPLEKAVTEDLR
AYLAFQYVEGGQKPAPRTLARRLSAMRQFYRFLVSEGRRADDPASALDSPKQGRPLPKILTVEEVTRMIDSAQTRGGPEG
LRLVALLEVLYATGLRVSELVGLPMAAILRDGRGLIVRGKGGKERMVPLSEPASAALNVYLPWRSHFILAGRENGPVAFL
FPSRSSTNGHLTRQRFAQLLKELAIESNIDPEKVSPHVLRHAFATHLLDRGADLRSVQKMLGHADIATTQIYTHVVSERL
KQVVHEHHPLARRKTIRTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-43 46
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-43 46