Gene Information

Name : cat (AZOBR_10452)
Accession : YP_005030149.1
Strain : Azospirillum brasilense Sp245
Genome accession: NC_016617
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 418939 - 419574 bp
Length : 636 bp
Strand : -
Note : -

DNA sequence :
ATGGAAAACGTCTTCGAAAGCCCGTTCAAGGGCATGGTTCTGGACAAGCAGGTCACCAACCCGAACATCGTCGTTGGCCG
CTACAGCTATTATTCCGGCTATTATCATGGCCACAGCTTCGACGACTGCGCCCGGTTTCTTCTCCCGGACGAGGGCGTCG
ACCGGTTGGTGATCGGCAGCTTCTGCTCGATCGGGTCCGGTGCGGCCTTCATCATGGCGGGCAACCAAGGCCACCGGAAC
GACTGGATCAGCACCTTTCCCTTCTTCTGGATGCCCGAGGTGCCGTCGTTCGTCGGCGCGCGGAACGGCTATCGACCGGC
CGGCGATACGGTGATCGGCAACGACGTCTGGATCGGGTCGGAAGCCATCGTCATGCCCGGCGTCACCATCGGTGACGGCG
CTGTGATCGGCACGAGGGCGCTGGTGACGCGGGATGTCGAGCCCTACGCGATCGTGGGCGGCAACCCCGCCCGGGTGATC
CGCAAGCGCTTCGACGATGATCTCATCGCGTTGCTGCTCGAGATGAGGTGGTGGGATTGGTCCGATGACCAGTTGCAGGG
CGCCATGCCGATCCTGACCAGCGGCGACGTCGCGCTCCTGCACCGCCACTGGCAGGACGTGATTAAGCACACCTGA

Protein sequence :
MENVFESPFKGMVLDKQVTNPNIVVGRYSYYSGYYHGHSFDDCARFLLPDEGVDRLVIGSFCSIGSGAAFIMAGNQGHRN
DWISTFPFFWMPEVPSFVGARNGYRPAGDTVIGNDVWIGSEAIVMPGVTIGDGAVIGTRALVTRDVEPYAIVGGNPARVI
RKRFDDDLIALLLEMRWWDWSDDQLQGAMPILTSGDVALLHRHWQDVIKHT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 4e-62 69
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 4e-62 69
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 1e-61 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat YP_005030149.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 4e-62 72
cat YP_005030149.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 2e-62 69
cat YP_005030149.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 2e-62 69
cat YP_005030149.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 5e-62 68
cat YP_005030149.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 5e-60 66
cat YP_005030149.1 chloramphenicol acetyltransferase AM180355.1.gene2499. Protein 1e-32 48
cat YP_005030149.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 2e-38 43
cat YP_005030149.1 chloramphenicol acetyltransferase NC_011595.7057349.p0 Protein 2e-27 42
cat YP_005030149.1 chloramphenicol acetyltransferase NC_010410.6000796.p0 Protein 2e-27 42
cat YP_005030149.1 chloramphenicol acetyltransferase NC_011586.7045146.p0 Protein 8e-28 41