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Name : gabD (AZOBR_140167) Accession : YP_005031827.1 Strain : Azospirillum brasilense Sp245 Genome accession: NC_016617 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NADP+] (SSDH) Function : - COG functional category : - COG ID : - EC number : - Position : 2035614 - 2037107 bp Length : 1494 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8297211; Product type e : enzyme DNA sequence : ATGCCGTATGATTCCGTGGACACCGCTCGCCGTCTTGGGTTGAAGGACGCCGAGTTGCTGCGATTCCAGGGCTTCGTCGA TGGCCGGTGGATCGACGCCGACAGCGGGAAGACCGTGGAGGTGACCAACCCCGCCGACGGCAGCGTCCTGGGCAGCGTGC CGATGATGGGCGCCGACGAGACGCGCCGGGCCATCGAGGCCGCCGAGCGCGCCTGGCCGGCCTGGCGGGCGCTGACCGCC AAGGAACGAGCGAAGACCCTGCGGACGTGGTTCGACCTGATGATGGCGAACCAGGAGGATATCGCCCGCATCATGACGGC TGAGCAGGGCAAGCCGCTGGCCGAGGCGCGGGGCGAGGTGGCCTACGCCGCGTCCTTCATCGAATGGTTCGCCGAGGAGG GCAAGCGCGTCTACGGCGACACCATCCCGCAGCATCTGCCGGGCCGCCGCATCGTCGTGACCAAGGAGCCGATCGGCGTC ACCGCCGCCATCACGCCGTGGAACTTCCCGGCGGCGATGATCACCCGCAAGGCCGGCCCGGCGCTGGCCGCCGGCTGCCC GATGGTCATCAAGCCGGCGACCGCCACCCCGCTGACCGCGCTCGCCATGGCGGTGCTGGCGGAGCGGGCGGGCATTCCGG CGGGCATCCTGAGCGTCGTCACCGGCTCCGCCCGCGCCATTGGCGGCGAGATGACCGGAAACCCGACGGTGCGCAAGCTG ACCTTCACCGGCTCCACCGAGATCGGCAAGGAGCTGATGGCCCAATGCGCCGGCACGGTGAAGAAGGTGTCGCTGGAACT GGGCGGCAACGCGCCCTTCCTGGTCTTCAACGACGCCGACCTTGACGAGGCGGTGAAGGGGGCCATCGCGTCGAAGTACC GCAACACCGGCCAGACCTGTGTCTGCGCGAACCGTCTGCTGGTGCAGTCGGGAGTTTACGACGCCTTCGCGGCCAAGCTG GCCGAGGCGGTGAAGGCGCTGAAGGTCGGTCCCGGCCTGACCACCGAAGGGGCGCAGCAAGGGCCGCTGATCGATATGGC GGCGGTGGAGAAGGTCGAGGACCACATCCGCGACGCCACGGAGAAGGGCGCGCGCGTGGTGCTGGGCGGCAAGCGGCACG AACTGGGCGGCAGCTTCTTCGAGCCGACCATCCTCGCCGACGTGACTCCGGCGATGAAGGTGGCGCGCGAGGAAACCTTC GGCCCGGTCGCCCCGCTGTTCCGCTTCGAGACGGAGGAGGAGGCCGTGCGCATGGCCAACGCCACCGAATTCGGTCTGGC CGCCTATTTCTACAGCCGCGACATCGGCCGCGTCTGGCGGGTGGCGGAGGCGCTGGAATACGGCATCGTCGGCATCAACG AGGGCATCATCTCCACCGAGGTCGCCCCCTTCGGCGGCATGAAGGAAAGCGGCATCGGCCGCGAGGGTTCCAAGTACGGC ATCGAGGATTACTTGGAAATCAAGTATTTGTGCATGGGCGGCATCGGCGGCTGA Protein sequence : MPYDSVDTARRLGLKDAELLRFQGFVDGRWIDADSGKTVEVTNPADGSVLGSVPMMGADETRRAIEAAERAWPAWRALTA KERAKTLRTWFDLMMANQEDIARIMTAEQGKPLAEARGEVAYAASFIEWFAEEGKRVYGDTIPQHLPGRRIVVTKEPIGV TAAITPWNFPAAMITRKAGPALAAGCPMVIKPATATPLTALAMAVLAERAGIPAGILSVVTGSARAIGGEMTGNPTVRKL TFTGSTEIGKELMAQCAGTVKKVSLELGGNAPFLVFNDADLDEAVKGAIASKYRNTGQTCVCANRLLVQSGVYDAFAAKL AEAVKALKVGPGLTTEGAQQGPLIDMAAVEKVEDHIRDATEKGARVVLGGKRHELGGSFFEPTILADVTPAMKVAREETF GPVAPLFRFETEEEAVRMANATEFGLAAYFYSRDIGRVWRVAEALEYGIVGINEGIISTEVAPFGGMKESGIGREGSKYG IEDYLEIKYLCMGGIGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-145 | 68 |
