Gene Information

Name : Dsui_0580 (Dsui_0580)
Accession : YP_005026831.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Unknown
Product : ATP-dependent carboxylate-amine ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 577832 - 579169 bp
Length : 1338 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit

DNA sequence :
ATGACTCAGATGACTCCCCAGGAAATCGTGCACGAGCTGGACAAGCACATCGTCGGTCAGGCCCAGGCCAAGAAGGCCGT
GGCCATCGCTCTGCGCAACCGCTGGCGCCGCTCCCAGGTGGAAGAGGGCCTGCGCCACGAGATCACGCCGAAGAACATCC
TCATGATCGGCCCCACCGGCGTCGGCAAGACCGAGATCGCCCGCCGCCTGGCGCGCCTGGCCAATGCCCCCTTCATCAAG
ATCGAGGCCACCAAGTTCACCGAGGTGGGCTATGTGGGCCGGGACGTGGACACCATCATCCGCGACCTCATGGAGACCGC
CATCAAGGGCCAGCGCGAGCAGGCCATGAAGCGGGTGCGGGCCCGGGCCGAAGACGCGGCCGAGGACCGGGTCCTCGACG
CCCTGCTGCCTCCCGCCCGGGGTGCCGGCTTCTTCAACGAGAACCAGGGCAGCAGCGAGGATTCCACCACTCGCCAGAAA
TTCCGCAAGAAGCTGCGGGAGGGCGAACTGGACGACAAGGAAATCGACATCGAGGTGGCGGCCCCCGGCATGCAGGCGGA
GATTTTTGCGCCGCCGGGCATGGAGGAGCTGACCAGCCAGATCCAGGGCATGTTCCAGAGCATGGGCACGGCCCGCAAGA
AGTCGCGCAAGCTGAAAATTCCCGAAGCCATGAAACTGCTGGTGGAGGAAGAGGCGGCCAAGCTGGTCAATGACGAGGAA
GTGAAGCTGGAAGCCCTGAAGAACGTGGAGCAGAACGGCATCGTCTTCCTCGACGAGATCGACAAGATCGCCTCCCGCTC
CGATGCCCATGGCGCCGACGTCTCCCGCCAGGGCGTGCAGCGGGACCTCTTGCCCCTGGTGGAAGGCACCACCGTGTCCA
CCAAGTACGGCATGGTCAAGACGGACCACATCCTCTTCATCGCCAGCGGCGCCTTCCACCTGGCCAAGCCGTCGGACCTG
ATCCCCGAGCTGCAGGGCCGCCTGCCCATCCGGGTGGAACTGGATTCCCTCTCCGTCTCCGATTTCGAGCAGATCCTGAC
CCAGACCGACGCCTGCCTGACGCGCCAGTACCAGGCCCTGCTCGGCACCGAGGGCCTGAAGCTGGAATTCACCGCCGACG
GCATCAAGCGCTTGGCGGAGATCGCCTACTCGGTCAATGAAAAGACCGAGAACATCGGCGCTCGCCGCCTGTACACGGTC
ATGGAAAAGCTGCTGGAGGAAGTCTCCTTCACCGCCGGCAAGTCCGGCGCCGAGACCCTCACCGTGGACGGCGCCTACGT
GGATGCCCGCCTGGGCGAACTGTCCCGGGACGAGGACCTCTCCCGCTACGTGCTGTAA

Protein sequence :
MTQMTPQEIVHELDKHIVGQAQAKKAVAIALRNRWRRSQVEEGLRHEITPKNILMIGPTGVGKTEIARRLARLANAPFIK
IEATKFTEVGYVGRDVDTIIRDLMETAIKGQREQAMKRVRARAEDAAEDRVLDALLPPARGAGFFNENQGSSEDSTTRQK
FRKKLREGELDDKEIDIEVAAPGMQAEIFAPPGMEELTSQIQGMFQSMGTARKKSRKLKIPEAMKLLVEEEAAKLVNDEE
VKLEALKNVEQNGIVFLDEIDKIASRSDAHGADVSRQGVQRDLLPLVEGTTVSTKYGMVKTDHILFIASGAFHLAKPSDL
IPELQGRLPIRVELDSLSVSDFEQILTQTDACLTRQYQALLGTEGLKLEFTADGIKRLAEIAYSVNEKTENIGARRLYTV
MEKLLEEVSFTAGKSGAETLTVDGAYVDARLGELSRDEDLSRYVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 1e-94 47