Gene Information

Name : Dsui_3448 (Dsui_3448)
Accession : YP_005029618.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3707558 - 3708256 bp
Length : 699 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCGAATCCTCATCGTCGAAGACGATTCCCTGCTGGGAGACGGGCTCCAGGTCGGTCTGGGCCAGGCCGGCTTCACCGT
GGACTGGCTGCGCGACGGCCAGGAGGCCGCCACCGTCCTCGCCAGCCCCGAGGCCCACTGCTTTGCCGCTGTGGTGCTGG
ACCTCAACCTGCCCCAGCTGTCGGGCCAGGAGGTGCTGGCCCGCTGCCGCGCTGCCGGCAACCCGGTTCCGGTGCTGGTG
CTGACCGCCCGGGACGGGGTGCCCGACAAGCTTTTGGCCCTGGACGGCGGCGCCGACGACTACCTGGTCAAGCCTTTCGA
TCTGGACGAGGTGGCGGCCCGCCTGCGCGCCCTGATCCGCCGCAGTGCAGGCCGGGCGGCGCCGCTGCTGGTGCACGGGA
CCATCCGCCTGGACCCGGCGGCCCGCCGGGTGGAGCTGGCGGGGCAGCCGGTGGAGCTGTCGCCCCGGGAGTTCGCCCTG
CTCGAGGCCCTGCTCGCCGCCGCCGGCCGGGTGCTGACCCGGCACCAGCTGGAGGAGGCCGCCTACGGCTGGAACGAGAC
GGTGGACAGCAATGCGGTGGAGGTGCACATCCACCACCTGCGGCGCAAGTTCGGCAGCGACCTGATCCGCACCGTGCGCG
GCGTCGGCTACACCGTGGCCCGGGCGGCGTCCGCTACGCCCGCGGCGCCGGAGTCCTGA

Protein sequence : 
MRILIVEDDSLLGDGLQVGLGQAGFTVDWLRDGQEAATVLASPEAHCFAAVVLDLNLPQLSGQEVLARCRAAGNPVPVLV
LTARDGVPDKLLALDGGADDYLVKPFDLDEVAARLRALIRRSAGRAAPLLVHGTIRLDPAARRVELAGQPVELSPREFAL
LEALLAAAGRVLTRHQLEEAAYGWNETVDSNAVEVHIHHLRRKFGSDLIRTVRGVGYTVARAASATPAAPES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-22 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_3448 YP_005029618.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0487 Protein 7e-24 46
Dsui_3448 YP_005029618.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 4e-18 41
Dsui_3448 YP_005029618.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain U82965.2.orf14.gene. Protein 8e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_3448 YP_005029618.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0473 Protein 6e-22 43
Dsui_3448 YP_005029618.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 4e-18 42