Gene Information

Name : Dsui_3286 (Dsui_3286)
Accession : YP_005029458.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3527814 - 3529199 bp
Length : 1386 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain

DNA sequence :
ATGGCCTTCATTCCCGAAACCCCCGGGTCCGAATCCCCCGATCCCGCCGACCGCCCCGCCGAACCGACGGTGCTGGTGGT
GGACGACGAGGAGGGCATGCGCAGCTTCCTCACCCGCACCCTGGCCCTGCGCGGCTGGCAGGTGGAGGCGGCGGCCAGTG
CCGAGGAGGGGGCGGCCCAGCTGGCCGGGCGCCACTTCGACCTGATCATCCTGGATATCGCCCTGCCCGGAAAATCCGGC
CTGGAATGGCTGAAGGACCTGAAGGCCGCCGGTTTCGCCGGCGACGTCATCCTCATCACCGCCTTCGCCGACATGGAAAC
GGCCATCGACGCCCTGCGCGCCGGCGCTTCCGATTTCGTCCTCAAGCCCTTCCGCGTGGACCAGATCGTCAATTCCATCA
ACCGCTGCTTCGAGCGCGCCCGCCTGGCCCGGGAGAACTTCGTCCTGCGCCGCCAACTGGAAGAGCGGGGCGGCGCGAGG
GACGAGATCGTCGGCCACTCCGACAGCATCGCCCGCCTGCGGGCCCTGGTGCGGCGGGTGGCGCCGACGCCCTCGACGGT
GCTGATCCAGGGCGAGTCCGGCGTCGGCAAGGAACTGGTGGCCCGGGCCCTGCACCAGCTCTCGCCCCGGGCCTCCCGGC
CCTTCGTTGCGGTGAACTGCGCCGCCATTTCCGCCGACCTCATCGAATCCGAACTCTTCGGCCACGTGAAGGGCGCCTTC
ACCGGCGCCAAGGAGGCCCGCAACGGCCTCTTCTACTACGCCCACGGCGGCACCCTGTTCCTCGACGAAATCGGCGAGTT
CCCCCTGGCCCTGCAATCCAAGCTGCTGCGGGTGCTGGAGGAGCGCAGGATCCGCCCCGTCGGTACCGAGCACGAGGTGC
CGGTGGATGTGCGGGTGGTGGCCGCCACCAACCGGGACCTGAAGCAGGAGGCAGCCCAGTGCCGCTTCCGCCAGGACCTC
TTCTACCGCCTGGAAGTGATGACCCTCACCGTGCCGCCCCTGCGCCAGCGCGCCGAGGACGTGCCCGAGCTGGCGGCCCT
GTTCATGGACAACCTGTGCGTCCAGCTCGGCGTGGCGCCCCTGCTCATCACCCCCGAGGTGGCCCACGCCCTCTCGGCCT
ACACCTGGCCCGGCAACGTGCGGGAGCTGCGCAACTTCGTCGAGCGCTCCCTGCTCTTCGGCGAATTTCCCCTGGACTCC
CTGGGCAGCGACGGCGCCGCCATGGAGCCGGCGGCAGCGCCCCCCTCCCTGCTTCTGGCCGAGGTGGAAAAACGCCACAT
CCTGGCGGTGCTGGCCCAGAGCAACGGCAGCAAGGCCCGGGCGGCGGACCTCCTGGGCGTCTCCCGCAAGACCCTGGACC
GCAAGTGCGCCGAGTGGGGGGTATGA

Protein sequence :
MAFIPETPGSESPDPADRPAEPTVLVVDDEEGMRSFLTRTLALRGWQVEAAASAEEGAAQLAGRHFDLIILDIALPGKSG
LEWLKDLKAAGFAGDVILITAFADMETAIDALRAGASDFVLKPFRVDQIVNSINRCFERARLARENFVLRRQLEERGGAR
DEIVGHSDSIARLRALVRRVAPTPSTVLIQGESGVGKELVARALHQLSPRASRPFVAVNCAAISADLIESELFGHVKGAF
TGAKEARNGLFYYAHGGTLFLDEIGEFPLALQSKLLRVLEERRIRPVGTEHEVPVDVRVVAATNRDLKQEAAQCRFRQDL
FYRLEVMTLTVPPLRQRAEDVPELAALFMDNLCVQLGVAPLLITPEVAHALSAYTWPGNVRELRNFVERSLLFGEFPLDS
LGSDGAAMEPAAAPPSLLLAEVEKRHILAVLAQSNGSKARAADLLGVSRKTLDRKCAEWGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 1e-62 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 1e-62 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_3286 YP_005029458.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains BAC0089 Protein 5e-72 46
Dsui_3286 YP_005029458.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains BAC0467 Protein 1e-66 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_3286 YP_005029458.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG0116 Protein 2e-52 44
Dsui_3286 YP_005029458.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG1214 Protein 2e-62 43
Dsui_3286 YP_005029458.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG1249 Protein 2e-58 42