Gene Information

Name : Dsui_0311 (Dsui_0311)
Accession : YP_005026570.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 313136 - 315211 bp
Length : 2076 bp
Strand : -
Note : PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG

DNA sequence :
TTGGCGGAAAAGAAGGCCGGGCCGGCCAAGGCCGCCAAGGCGCCAGCCAAGGGGGCCAGCGCCCTGCAGCAGAAGCTGGG
CAAGCTGGGGCTGCACTCGCGCAACGATCTGCTGCTGCATTTCCCCTTGCGCTACGAGAACGAGACAGCGGTGGTGCCGG
TCAATGAGGCGCCCTGGGACGAGCCGGTGCAGGTGGAGGTGCGGGTCACCGACGTCTCCATCCAGTTCCGCCCCCGTCGC
CAGCTGGTGGCCCGCTGCGAGGACGACTCGGGGGAACTGTGGCTGCGCTTCCTCAATTTCTACGGCAGCCAGGTCAAGCA
GCTGGAAACGGCCCGGGACGAGGGCCGCAAGCTGCGGGTCTTCGGCGAGATCCGGGGCGGCTTCTTCGGCAGCGAGATGG
TCCATCCCCGCTACAAGCCGGTGGAGGAGGGGAGTGCCCTGCCCCAGTCCCTGACGCCGGTCTATCCCACCACCGCCGGC
CTGGCCCAGTCCGCCCTGCGCAAGCTTATCGGCAAGGCCCTGGCCGAGTCCGACCTGGCCGACACCCTGGACCAGGCGCA
GTTGCGGGCCCTGGCCCTGGAACCCTTCGCCGCCAGCGCCCGCCTGCTGCACGCGCCGCCCCCCGGGGTCGATGAATTCG
CCCTGCAGAACCACCGCCATCCGGCCTGGCGTCGCATCAAGTTCGACGAACTGCTGGCCCAGCAGTTGTCCCTGCGCCGG
GCCTACCTGGCGCGGCGGGAAAAGGGGGCGCCGCGGCTGGATGCCCCCGGCGCCCTGGCGCGGCAGCTGCTGGGCCAGCT
TTCCTTCCAGCTCACCGGGGCCCAGCAACGGGTGTGGCAGGAGATCGCCCGGGACCTGGCCGAGGCCCATCCCATGCAGC
GCCTGCTGCAGGGGGACGTGGGCAGCGGCAAGACCATCGTCGCCGCCCTGGCGGCCTGCCAGGCCATCGAGTGCGGCTGG
CAGGCGGCTTTCATGGCGCCCACGGAAATCCTCGCCGAGCAGCATTACAAGAAGCTCTCGGCCTGGCTGGAGCCCCTCGG
CATTACCGTCGCCTGGCTCTCCGGCAGCCTCAAGTCGGCCAAGAAAAAGGCCGCCCAGCAGGAGGCCGCCGCCGGCGCCC
AGCTGGTGGTGGGCACCCACGCCCTGATCCAGGCCGACGTCGATTTCCTGCGCCTGGGGCTGGCCATCGTGGACGAGCAG
CACCGCTTCGGCGTGGCCCAGCGCCTGGAACTGCGCAAGAAGGGCAAGGCCGGCATCCCGCATCAGCTGATGATGTCCGC
CACGCCCATCCCCCGCACCCTGGCCATGAGCTACTACGCCGACCTGGATGTCTCGGTGATCGACGAGCTGCCGCCGGGGC
GCACCCCCATCCGCACCAAGCTGGTCTCCGACGCCCGTCGCGACGAGGTGGTGGGGGCGGTGCGCCACGCCGTGGAGAGC
GGGCGCCAGGCCTACTGGGTCTGTCCCCTGATCGAGGAAAGCGAGAAGCTGGACCTGCAGGCCGCCATCGACACCCACGC
CATCCTGGCCGAGGAGCTGGAAGGACTGTCGGTGGGCCTGGTGCACGGCCGTCTCAAGCCCGACGAGAAGGCCGCCACCA
TGGCCGCCTTCGCCGCCGGGGAGATCCAGGTGCTGGTGGCTACCACGGTGATCGAGGTGGGGGTGGACGTGCCCAACGCC
AGCCTCATGGTGATCGAGCATGCGGAGCGCTTCGGCCTGGCCCAGCTGCACCAGCTGCGGGGCCGGGTGGGCCGGGGCGC
CCACGAGTCGGCCTGCGTTCTGCTCTACGCCACACCCCTGTCCCAGACCGGGCGGGCTCGCCTGAAAATCATCTACGAGA
ACACCGACGGCTTCGAGATCGCTCGTCAGGACCTGCAGCTGCGCGGCCCCGGCGAGTTCGTCGGCGCCCGCCAGAGCGGC
GTGCCCCTGCTGCGCTACGCCGACCTGGAAATGGACGCCGACCTGGTGGAACTGGCGCGGGACCTGGCCGAACGCCTGCT
GCGGGACGATCCGCCCCGGGCCGAGCGCCATCTGCGGCGCTGGCTGGGCAGCCGGGAAGAGCTGCTCAAGGCCTGA

Protein sequence :
MAEKKAGPAKAAKAPAKGASALQQKLGKLGLHSRNDLLLHFPLRYENETAVVPVNEAPWDEPVQVEVRVTDVSIQFRPRR
QLVARCEDDSGELWLRFLNFYGSQVKQLETARDEGRKLRVFGEIRGGFFGSEMVHPRYKPVEEGSALPQSLTPVYPTTAG
LAQSALRKLIGKALAESDLADTLDQAQLRALALEPFAASARLLHAPPPGVDEFALQNHRHPAWRRIKFDELLAQQLSLRR
AYLARREKGAPRLDAPGALARQLLGQLSFQLTGAQQRVWQEIARDLAEAHPMQRLLQGDVGSGKTIVAALAACQAIECGW
QAAFMAPTEILAEQHYKKLSAWLEPLGITVAWLSGSLKSAKKKAAQQEAAAGAQLVVGTHALIQADVDFLRLGLAIVDEQ
HRFGVAQRLELRKKGKAGIPHQLMMSATPIPRTLAMSYYADLDVSVIDELPPGRTPIRTKLVSDARRDEVVGAVRHAVES
GRQAYWVCPLIEESEKLDLQAAIDTHAILAEELEGLSVGLVHGRLKPDEKAATMAAFAAGEIQVLVATTVIEVGVDVPNA
SLMVIEHAERFGLAQLHQLRGRVGRGAHESACVLLYATPLSQTGRARLKIIYENTDGFEIARQDLQLRGPGEFVGARQSG
VPLLRYADLEMDADLVELARDLAERLLRDDPPRAERHLRRWLGSREELLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 3e-96 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_0311 YP_005026570.1 ATP-dependent DNA helicase RecG BAC0356 Protein 5e-140 55