Gene Information

Name : Dsui_2857 (Dsui_2857)
Accession : YP_005029034.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3046670 - 3047419 bp
Length : 750 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein

DNA sequence :
ATGAATGAGGCAGCGATGGCAAGTGCGGCAGCAGTAGCGGAAAGTGCGATGGAGAATAGGGCCAGCGATACGGCCGTGCT
GGCCTGCCAGGGCCTGTCCAAGGTCTATCGCCAGGGCGACCTGGAAGTGCCGGTGCTGACCCGCATCGACCTTTCCCTGC
AGCCCGGTGAGCGCCTGGCGGTGGTGGGTTCCTCCGGCTCGGGCAAGAGCACCCTGCTGCACCTCCTGGGCGGGCTGGAC
CGGCCCACCGCCGGCACGGTGCGGCTCAAGGGCGCCGATCCCTTCAGCCTGTCCGAGGCGGCCCGGGGCGAGTGGCGCAA
CCGCTACCTGGGCTTCGTGTACCAGTTCCACCACCTGCTGGCGGAATTCACGGCCCTGGAGAACGTGGCCATGCCCCTGC
TCATCCGCCGCCTGCCCCGGGCCGAGGCGGAAAGCCAGGCCGAGGCCATGCTGCAGAAAGTCGGGCTGGGCCATCGCCTG
CACCACCTGCCGTCGGAACTGTCCGGCGGCGAGCGGCAGCGGGCGGCCATCGCCCGGGCCCTGGTGACCCGCCCGGCCTG
CGTGCTGGCCGATGAACCGACGGGCAACCTGGACCGTCATACGGCGGAGCAGGTGTTCGACCTGATGCTGGAAGTGAGCC
GGGAGCAGGGCACCGCCTTCGTCATCGTCACCCACGATCCGGCCCTGGCGGCCCGGGCCGACCGCACGGTGCACCTGGCC
GACGGCATGTTCCTGGAGGAGCCCTGGTAA

Protein sequence :
MNEAAMASAAAVAESAMENRASDTAVLACQGLSKVYRQGDLEVPVLTRIDLSLQPGERLAVVGSSGSGKSTLLHLLGGLD
RPTAGTVRLKGADPFSLSEAARGEWRNRYLGFVYQFHHLLAEFTALENVAMPLLIRRLPRAEAESQAEAMLQKVGLGHRL
HHLPSELSGGERQRAAIARALVTRPACVLADEPTGNLDRHTAEQVFDLMLEVSREQGTAFVIVTHDPALAARADRTVHLA
DGMFLEEPW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-25 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-25 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-25 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_2857 YP_005029034.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 2e-36 49
Dsui_2857 YP_005029034.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 8e-39 46
Dsui_2857 YP_005029034.1 lipoprotein releasing system, ATP-binding protein CP001581.1.gene798.p Protein 3e-37 42