Gene Information

Name : Dsui_0266 (Dsui_0266)
Accession : YP_005026525.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 265600 - 266283 bp
Length : 684 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCGCATACTCCTGGCTGAAGACGACAAAATCATCGCGGACGGGCTTTCCCGTTCCCTGCGGCAGGGCGGCTACGCCGT
CGACTGCGCCTATACGGGTCTGGAGGCCGACACGGCCCTGATGACCAATTCCTACGACCTGCTCATCCTCGACCTGGGCC
TGCCCAAGCTGCCCGGGCTGGAGGTGCTGAAGCGCCTGCGGGCCCGCAATGTGCAGCTGCCGGTGCTGATCCTCACCGCT
CTCGACGGCACCGGCGACCGGGTCAAGGGCCTGGACCTGGGGGCCGACGATTACATGGCCAAGCCCTTCGAGCTGGCCGA
ACTGGAGGCCCGGGTGCGGGCCCTCACCCGGCGCTCCTCCGGCACCGCCCCGGTCATCACCTGCGGTGCCTTGACCTACG
ACCAGGCCGGCCGGGTGGCCCAGCTGGACGGCCAGAACCTGGACCTCTCGGCCCGGGAACTGGGGCTGCTGGAAATCCTC
CTCTCCCGGGTCGGCCGCCTGGTTTCCAAGGATCAGCTGGTGGACCACCTGTGCGGCTGGGGCGAGGAGGTGAGCCACAA
CGCCATCGAGGTGTACATCCACCGCCTGCGCAAGAAGCTGGAATCCGGCGGGGTGCGCATCGCCACCGTGCGCGGACTCG
GTTACTGCCTTGAAAAGCCGCAAGAACCCGGCGCCGGCCGCTAA

Protein sequence : 
MRILLAEDDKIIADGLSRSLRQGGYAVDCAYTGLEADTALMTNSYDLLILDLGLPKLPGLEVLKRLRARNVQLPVLILTA
LDGTGDRVKGLDLGADDYMAKPFELAELEARVRALTRRSSGTAPVITCGALTYDQAGRVAQLDGQNLDLSARELGLLEIL
LSRVGRLVSKDQLVDHLCGWGEEVSHNAIEVYIHRLRKKLESGGVRIATVRGLGYCLEKPQEPGAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-32 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_0266 YP_005026525.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0487 Protein 1e-31 46
Dsui_0266 YP_005026525.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 5e-29 43
Dsui_0266 YP_005026525.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 6e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_0266 YP_005026525.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0473 Protein 1e-31 45
Dsui_0266 YP_005026525.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 1e-24 42
Dsui_0266 YP_005026525.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-26 41