Gene Information

Name : Dsui_2597 (Dsui_2597)
Accession : YP_005028789.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2752441 - 2753355 bp
Length : 915 bp
Strand : -
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD

DNA sequence :
ATGCTCTTAGCCAACATTTCCCTGATTGAGGAATTCATCAACACGGTTTGGCTGCAGAACGGTTTGGCTCAGAACACTCT
GTCCGCCTATCGCAGTGACCTGGTGCAGTTTGCCAAATGGCTGAAGGTTCCCTTGTCCGCCGCCGGCGAGGTGGAAATCA
GCAACTACCTGGTGCATCTCTACTCCCAGCCGATCCGGCCGAAGCCATCCAGTCAGCGCCGCCTAATATCTGTCCTACGT
CGCTTCTACGGATGGTTGTTTGAGGGTCACCGGATCCAGAAGAATCCCATGCTGACGATGGAGTTGCCTTCGTTAGGGGT
CCGCCTTCCGAAGGTCCTGGCCATGGCCCAGGTAGAGGCCCTGCTTGAAGCACCCGACACCTCTACAGCCTTGGGACTCC
GCGATCGAGCGCTATTGGAAGTGCTCTATGCAACGGGGTTTAGGGTTAGTGAGTTGGTTGGCCTCACACTTACCCAGTTG
AACCTGGACATGGGAGTTGTGCGGACGATCGGAAAAGGGAACAAGGAACGCCTGGTTCCTCTGGGTGAAATTTCGTCGGA
TTGGTTGGTGCGCTACCTGGCCGAATCGCGCCCGGTGCTACTGAAGGGGCGAAGTAGCGACGGTCTATTCATCACGGGCC
ACCAGAAAAAGGACAACAACGATGCACGGATGACCAGGCAGATGGCCTGGCTCCTTATCAAGAAATATGGGGAGTTGGTG
GGGATCCCGCGTGATCGCATATCCCCCCACGTTCTTCGCCATGCCTTTGCCACCCATCTGCTTAACTGCGGTGCTGATTT
GCGCATAGTGCAGCTGCTCCTGGGGCATGCCGACATCTCCACCACCCAAATCTACACCCATGTGGCCAGGGAGCGATTAA
AGGAACTACACGCCAAGCATCACCCTCGAGGATAA

Protein sequence :
MLLANISLIEEFINTVWLQNGLAQNTLSAYRSDLVQFAKWLKVPLSAAGEVEISNYLVHLYSQPIRPKPSSQRRLISVLR
RFYGWLFEGHRIQKNPMLTMELPSLGVRLPKVLAMAQVEALLEAPDTSTALGLRDRALLEVLYATGFRVSELVGLTLTQL
NLDMGVVRTIGKGNKERLVPLGEISSDWLVRYLAESRPVLLKGRSSDGLFITGHQKKDNNDARMTRQMAWLLIKKYGELV
GIPRDRISPHVLRHAFATHLLNCGADLRIVQLLLGHADISTTQIYTHVARERLKELHAKHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-54 49
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-54 49