Gene Information

Name : Dsui_2360 (Dsui_2360)
Accession : YP_005028561.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2510797 - 2512158 bp
Length : 1362 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Sigma-54 interaction domain

DNA sequence :
ATGGCCGAACTGCTGCTGGTGGATGACGACGCCGACATCCTCAAACTGCTGGCCCTGCGCCTGGCCACCGCCGGCCACCG
GGTGCGCACCGCCGACAGCGGCGAGCAGGCCCTGGTCATGTTCCAGGCCCAGCGGCCCCAGCTGGTCATCACCGACCTGA
AGATGGGCGGCATGGACGGCCTCGCCCTGTTCGACGAGATCCAGCGCCGGGCCCCGACCCTGCCGGTGATCGTGCTCACC
GCCCACGGCACCATTCCCGAGGCGGTGGATGCCACCCGCCGCGGCGTCTTCGGCTTCCTCACCAAACCCTTCGACGGCAA
GGCCCTGCTGGAGCAGGTGGAGCAGGCCCTGCGCCTGGCGTCCCCCGCCGGCCAGGGCGGCGGCGAGAACGAGCCCTGGC
GCGCCGATCTGGTGGGCGGCAGCCCGGCCATGCAGGAATTGCTGGAGCGGGCCCGCCTGGTGGCGGCCTCCGATGCCAGC
GTCTTCATCGCCGGCGCCAGCGGCACCGGCAAGGAACTGCTGGCCCGGGCCATCCACCTGGCCAGCCCCCGGGCGGATAA
GCCTTTCGTCGCCATCAACTGCGCCGCCATTCCGGAAAACCTGCTGGAGTCCGAACTCTTCGGCCACCGCAAGGGTGCCT
TCACCGGCGCCACCTACAACCACAAGGGCCTGTTCCTGGAGGCGGACGGCGGCACGGTCTTCCTCGACGAGATCGGCGAC
ATGCCCCTGTCCCTCCAGGCCAAGCTGCTGCGGGTGCTGCAGGAGCGCCAGGTGCGCCCCGTGGGCGCCACCCAGGCGGT
GCCGGTTGATGTGCGGGTGGTTTCGGCCACCCACCGGGACCTGGACGAACTCCTGAAAAGCGGCCAGTTCCGCGAAGACC
TCTACTACCGCCTCAACGTGGTCTCCCTGGCTCTGCCCCTATTGGCGGAGCGGCGGGAGGACATTCCCCTGCTGGCCAAC
CATTTTCTGCAGCGCACGGCCAGCCGCTACGGCAAACCCGTCACCGCCTTCGCCCCGGATGCCATGGAGGCCCTGGTGAC
GGCGCCCTGGCCGGGCAATGTGCGGCAGTTGCAGAATGTGGTGGAGCAGGCGGTGGCCCTCTCCCCGGTGAGCGGCGGCC
TGGTGCCGGCGGCCCTGATCCAGGGGGCGCTGCGCTCCGGTGACAGCGCCTTCACTTCCCTGGATGAGGCGAAGAAGGTG
TTCGAGCGGGATTACCTGGTGCGCCTGCTGCGCCTCACCGAAGGCAGCGTCACCCAGGCGGCCCGTCTGGCCCAGCGCAA
CCGCACCGAGTTCTACAAGCTGCTGGAACGGCATCAGCTGGATGCCAAGCAGTTCAAGCCCGGGGCCGGCGACAGCGCCT
GA

Protein sequence :
MAELLLVDDDADILKLLALRLATAGHRVRTADSGEQALVMFQAQRPQLVITDLKMGGMDGLALFDEIQRRAPTLPVIVLT
AHGTIPEAVDATRRGVFGFLTKPFDGKALLEQVEQALRLASPAGQGGGENEPWRADLVGGSPAMQELLERARLVAASDAS
VFIAGASGTGKELLARAIHLASPRADKPFVAINCAAIPENLLESELFGHRKGAFTGATYNHKGLFLEADGGTVFLDEIGD
MPLSLQAKLLRVLQERQVRPVGATQAVPVDVRVVSATHRDLDELLKSGQFREDLYYRLNVVSLALPLLAERREDIPLLAN
HFLQRTASRYGKPVTAFAPDAMEALVTAPWPGNVRQLQNVVEQAVALSPVSGGLVPAALIQGALRSGDSAFTSLDEAKKV
FERDYLVRLLRLTEGSVTQAARLAQRNRTEFYKLLERHQLDAKQFKPGAGDSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 9e-64 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 9e-64 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_2360 YP_005028561.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains BAC0467 Protein 7e-82 52
Dsui_2360 YP_005028561.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains BAC0089 Protein 4e-83 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_2360 YP_005028561.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG1249 Protein 3e-71 49
Dsui_2360 YP_005028561.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG1214 Protein 3e-72 49
Dsui_2360 YP_005028561.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG0116 Protein 6e-63 47