Gene Information

Name : Dsui_2248 (Dsui_2248)
Accession : YP_005028452.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2395218 - 2395895 bp
Length : 678 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCGAATTCTCATCGTGGAAGACGACCAGGCCCTGGGGGAAGGCATCCAGATGGGCCTGCGCCAGGGCGGCTGGCAGGC
CGACTGGGTGCAGGATGGCGAGGCTGCCGGCCACGCCCTGGCCAGCGAGCCCTTTGCCGCCCTGGTGCTCGACCTGGGGC
TGCCCAAGGTGTCCGGCCTGGAGGTGCTGCGCCAGCTGCGGGCCCGGGGCGATGCCATGCCGGTGCTGATCCTCACCGCC
CGGGATGCGCCGGATGACGTGGTGGCCGGCCTCGATGCCGGGGCCGACGACTACATGATCAAGCCCTTCAACCTGCAGGA
ACTGGGCGCCCGCCTGCGGGCCCTGACCCGCCGCCGCGGCGGCCGTGCCGTGCCGGAAATCGTCCATGGCAATCTGCGCC
TGGACCCGGCCGGGCGGCGGGTGACCCTGGCGGGGCAGGCGGTGGAACTGTCGGCCCGGGAATTCGACCTGCTGCACGAA
CTGCTGGCCCAGGCCGGCCGGGTGCTGACCAAGGCCCAGATCGAATCCCATCTCTATGCCTGGGGCAGCGAGCTGGAATC
CAATGCCATCGAGGTGCACATCCATCACCTGCGGCGCAAGCTGGGGGCCGACCTGATCCGCACCGTGCGCGGCGTCGGCT
ACCTGATCCCCGAAGCCGGCCGGAGTCCGGCGCCATGA

Protein sequence : 
MRILIVEDDQALGEGIQMGLRQGGWQADWVQDGEAAGHALASEPFAALVLDLGLPKVSGLEVLRQLRARGDAMPVLILTA
RDAPDDVVAGLDAGADDYMIKPFNLQELGARLRALTRRRGGRAVPEIVHGNLRLDPAGRRVTLAGQAVELSAREFDLLHE
LLAQAGRVLTKAQIESHLYAWGSELESNAIEVHIHHLRRKLGADLIRTVRGVGYLIPEAGRSPAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-28 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_2248 YP_005028452.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0487 Protein 9e-25 44
Dsui_2248 YP_005028452.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 1e-25 43
Dsui_2248 YP_005028452.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002516.2.879194.p Protein 1e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_2248 YP_005028452.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 5e-27 46
Dsui_2248 YP_005028452.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0473 Protein 2e-29 44