Gene Information

Name : Dsui_1993 (Dsui_1993)
Accession : YP_005028206.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2100215 - 2101696 bp
Length : 1482 bp
Strand : +
Note : PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase

DNA sequence :
ATGGGCGGCGGCAGAGTAGAATTGCCCTTCCTCGACATTGACCTCGCCATGAACAAGCCCCGTCGTTTCTCCCGCTCCGA
CCCTTCCGATTCCCCCATCGATCCGGCCCTGGCCCAGTTGCGGGTGCCGCCCAATTCCCTGGAGGCCGAACAGTCCCTGC
TGGGCGGCCTGCTGCTGGACAACCAGGCCTGGGACAAGGTGGGCGACATGGTCGCCGAGGGCGACTTCTACCGGGACGAA
CACCGGCGCATTTTCCGCCAGATCCAGCGCCTGCTCTCCCTGGGCAAGCCGGCGGACGTGGTGACGGTGTCCGAGGCCCT
GGATGCGGCCGGCGAGACCGAACATACCGGCGGCCTGGCCTATCTGGGCGAACTGGCGGCCAATACGCCGTCGGCCTCCA
ACATCCGCCGCTACGCCGAAATCGTGCGGGAGCGGGCCATCCTGCGCCAGCTGGTGACGGCCGGCGACGAGATCGCCTCC
AGCGCCCTCAACCCCCTGGGGCGGGACGCCAAGACCCTGCTCGACGAAGCCGAGACCCGGGTTTTCGAAATCGCGGAAAA
GGGCGCCCATTCCCAGCAGGGTTTCGTGCACATCAACCCCCTGCTCAACGAGGTGGTGCAGAAGATCGAGGAACTGCATG
ACCGGGACAATCCCTCCGACGTCACCGGCGTGCCCACCGGCTTCATCGACCTGGATTCCAAGACCTCCGGCCTGCAGCCC
GGCGACCTCATCATCGTCGCCGGCCGCCCCTCCATGGGCAAGACCGCCTTCGCCCTCAACATCGCCGAATACGTGGCGGT
GGAGCAGGGCCTGCCGGTGGGCGTGTTCTCCATGGAAATGGGCGGCGCCCAGCTGGCCATGCGGATGGTGGCGTCCCTCG
GGCGCCTCGATTCCCACCGCCTGCGTACCGGCCGCCTCAACGACGAGGAGTGGTCCCGCCTCTCCATGGCCCTCGGCAAG
ATGCACGAGAAGCCCCTCTACATCGACGAGACCGGCGGCCTCAACCCCTTGGACCTGCGGGCCCGGGCCCGGCGCCTGGC
GCGCCAGTACGGCGGCAAGCTGGGCCTGATCGTGATCGACTACCTGCAGCTGATGGTCTCCGCCAAGGCCGGCGGCGGCG
AGAACCGGGCCACGGAAGTGTCGGAAATCTCCCGGGCCCTGAAGTCCCTGGCCAAGGAACTGTCGGTGCCGGTGATCGCC
CTGTCCCAGCTGTCGCGGAAGGTGGAAGAGCGGACCGACAAGCGCCCCATGATGTCCGACTTGCGCGAATCCGGCGCCAT
CGAACAGGATGCGGACGTGATCATGATGATGTACCGGGACGACTACTACAACAAGGAAAAGAGCCAGTATCCGGGCCAGG
CCGAAGTCATCATCGGCAAGCAGCGTAACGGCCCCACCGGCACGGTGCACCTCACCTTCCTCGGCGAATACACCCGCTTC
GAGAACTGCGCCTTCCAGGGCAGCCGGGGTCCCGAGTACTGA

Protein sequence :
MGGGRVELPFLDIDLAMNKPRRFSRSDPSDSPIDPALAQLRVPPNSLEAEQSLLGGLLLDNQAWDKVGDMVAEGDFYRDE
HRRIFRQIQRLLSLGKPADVVTVSEALDAAGETEHTGGLAYLGELAANTPSASNIRRYAEIVRERAILRQLVTAGDEIAS
SALNPLGRDAKTLLDEAETRVFEIAEKGAHSQQGFVHINPLLNEVVQKIEELHDRDNPSDVTGVPTGFIDLDSKTSGLQP
GDLIIVAGRPSMGKTAFALNIAEYVAVEQGLPVGVFSMEMGGAQLAMRMVASLGRLDSHRLRTGRLNDEEWSRLSMALGK
MHEKPLYIDETGGLNPLDLRARARRLARQYGGKLGLIVIDYLQLMVSAKAGGGENRATEVSEISRALKSLAKELSVPVIA
LSQLSRKVEERTDKRPMMSDLRESGAIEQDADVIMMMYRDDYYNKEKSQYPGQAEVIIGKQRNGPTGTVHLTFLGEYTRF
ENCAFQGSRGPEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-90 51
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-80 47
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-84 47
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-84 47
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 1e-80 47
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 1e-80 47
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 4e-82 46
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 5e-82 45
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 6e-65 42