Gene Information

Name : Dsui_1837 (Dsui_1837)
Accession : YP_005028054.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Resistance
Product : cation/cationic drug transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1936137 - 1936463 bp
Length : 327 bp
Strand : -
Note : PFAM: Small Multidrug Resistance protein

DNA sequence :
ATGCACTGGCTGCACCTGGCCATCGCCATCGTCGCCGAAGTCATCGCCACCTCGGCCCTGAAAGCCGCCGCCGGCTTTAC
CCGGCCCCTGCCCTCCCTGGTGGTGGTGGCCGGCTACGGCCTCGCCTTCTACTTTCTCTCCCTGACCCTCCGGGTCATTC
CCATGGGCGTCGCCTATGCCGTGTGGTCGGCCGTGGGCATCGCCCTGGTCTCCCTCATCGGCTGGCTGGTGTACGACCAG
CGTCTGGACGCTCCTGCCTTGCTGGGGATGGGGCTGATCGTCGCCGGCGTCGCCGTGATCCAGCTCTTCTCCCGCACCGC
CCACTAG

Protein sequence :
MHWLHLAIAIVAEVIATSALKAAAGFTRPLPSLVVVAGYGLAFYFLSLTLRVIPMGVAYAVWSAVGIALVSLIGWLVYDQ
RLDAPALLGMGLIVAGVAVIQLFSRTAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 2e-23 62
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 2e-23 62
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 2e-23 62
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 3e-23 62
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 2e-23 62
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 2e-23 62
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 2e-23 62
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 3e-23 62
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 2e-23 62
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 2e-23 62
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-23 62
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 3e-23 62
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 2e-23 62
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 2e-23 62
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-23 62
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 3e-23 62
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 2e-23 62
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 2e-23 62
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-23 62
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 2e-23 62
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 2e-23 62
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-23 62
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 3e-23 62
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 2e-23 62
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 2e-23 62
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 2e-23 62
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 2e-23 62
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 2e-23 62
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 2e-23 62
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 2e-23 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_1837 YP_005028054.1 cation/cationic drug transporter BAC0323 Protein 1e-23 62
Dsui_1837 YP_005028054.1 cation/cationic drug transporter BAC0324 Protein 7e-27 61
Dsui_1837 YP_005028054.1 cation/cationic drug transporter BAC0322 Protein 2e-26 60
Dsui_1837 YP_005028054.1 cation/cationic drug transporter NC_010410.6003348.p0 Protein 2e-27 58
Dsui_1837 YP_005028054.1 cation/cationic drug transporter BAC0002 Protein 2e-27 58
Dsui_1837 YP_005028054.1 cation/cationic drug transporter BAC0377 Protein 4e-21 57
Dsui_1837 YP_005028054.1 cation/cationic drug transporter CP001138.1.gene1489. Protein 2e-22 55
Dsui_1837 YP_005028054.1 cation/cationic drug transporter CP004022.1.gene1549. Protein 2e-20 54
Dsui_1837 YP_005028054.1 cation/cationic drug transporter NC_002695.1.913273.p Protein 5e-18 51
Dsui_1837 YP_005028054.1 cation/cationic drug transporter BAC0150 Protein 5e-18 50
Dsui_1837 YP_005028054.1 cation/cationic drug transporter BAC0192 Protein 3e-17 46
Dsui_1837 YP_005028054.1 cation/cationic drug transporter BAC0139 Protein 5e-15 44
Dsui_1837 YP_005028054.1 cation/cationic drug transporter BAC0140 Protein 1e-14 42
Dsui_1837 YP_005028054.1 cation/cationic drug transporter BAC0477 Protein 2e-10 41