Gene Information

Name : Dsui_1753 (Dsui_1753)
Accession : YP_005027979.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1839183 - 1840598 bp
Length : 1416 bp
Strand : -
Note : PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI

DNA sequence :
TTGAGCACTCCGCCCCCCTCCTCCCTGGCCGTGTGGCAACAGTTCCTGGCGAACTGCACCGAAGCGGCCGGCAATACCCA
TCCCCTGATGCCCGCGGGTCATCTGACCCGCATCAACGGACTGGTGATGGAGGCGGCCGGCCTCAAGCTGCCCCTGGGCA
GTTCCTGCCGCGTCCTGCCGCCGGGCGGTTCGCCGGTGGAGGCGGAGGTGGTCGGTTTCAACGGCGAGAAGCTCTTCCTC
ATGCCGTCGGACGACGTCTATGGGCTGTCCCCGGGTGCCGCCGTGGTGGCCCTGGAAACCCCCTCGCCGCCGCCCCTGGT
CGGCAAGCCCCCCCCCTTCCGCCGCCGTTCAGTGGACAAGGCCAAGCTGGTTCCGGTCGGCATGGGCCTTCTGGGAAGGG
TGGTCGATGGCGCCGGCCGTCCCCTGGACGGTCTCGGCCCCCTCCATGCGGAAGCCCTGCGCCCCCTGCACAGCCGGCCG
GTGAACCCCATGTCCCGGGCTCCCATTAGCCGCACCCTGGATGTGGGCGTGCGCGCCATCAACGGCCTGCTCACCGTCGG
CCAGGGCCAGCGGATGGGCCTCTTCGCTGGTTCCGGCGTCGGCAAGTCGGTGCTGCTGGGCATGATGGCCCGCTATACCG
AGGCCGAGATCATCGTCGTCGGCCTGATCGGCGAACGGGGCCGGGAAGTGAAGGAGTTCATCGAGCAGATCCTCGGGGAA
GAAGGCCGGCGCCGTTCCGCCGTCATTGCCGCCCCCGCCGACACCAGCCCCCTGATGCGCCTCCAGGGCGCCGCCTACGC
CACCTCCGTGGCCGAATATTTCCGCGACCAGGGCAAGCAGGTGCTGCTGATCATGGATTCCCTCACCCGCTATGCCATGG
CCCAGCGGGAAATCGCCCTGGCCATTGGCGAGCCCCCGGTGACCCGGGGCTATCCGCCCTCGGTCTTCGCCCGCCTGCCC
CAGCTGGTGGAGCGGGCCGGTAACGGCCCGGATGGCGGCGGTTCCATCACCGCCTTCTACACCGTCCTGGCGGAAGGGGA
CGATCAGCAGGACCCCATCGCCGACTCGGCCCGAGCCATCCTCGATGGCCACATCGTGCTCAATCGCCAGCTGGCCGACG
CCGGCCACTATCCGGCCATCGACATCGAGCAATCCATCAGCCGGGCCATGGTAAACCTGATCACCCCGGCCCAATTCGAC
CTAGTGCGGCGTTTCAAACAGCTCTATTCCCGCTACCAACGCTCCCGGGACCTGATCGCCGTCGGCGCCTATGTCGCCGG
CTCGGACCCCATGGTGGACCAGGCCATCCAGCTGATGCCCCTGCTGGAAAAATTCCTGCAACAGGACCTCTCCGACCGCT
CCAGCATTGAAGCCACCCTGGCCATGCTGCAACAGATATTTCCAAGCATCGGCTAG

Protein sequence :
MSTPPPSSLAVWQQFLANCTEAAGNTHPLMPAGHLTRINGLVMEAAGLKLPLGSSCRVLPPGGSPVEAEVVGFNGEKLFL
MPSDDVYGLSPGAAVVALETPSPPPLVGKPPPFRRRSVDKAKLVPVGMGLLGRVVDGAGRPLDGLGPLHAEALRPLHSRP
VNPMSRAPISRTLDVGVRAINGLLTVGQGQRMGLFAGSGVGKSVLLGMMARYTEAEIIVVGLIGERGREVKEFIEQILGE
EGRRRSAVIAAPADTSPLMRLQGAAYATSVAEYFRDQGKQVLLIMDSLTRYAMAQREIALAIGEPPVTRGYPPSVFARLP
QLVERAGNGPDGGGSITAFYTVLAEGDDQQDPIADSARAILDGHIVLNRQLADAGHYPAIDIEQSISRAMVNLITPAQFD
LVRRFKQLYSRYQRSRDLIAVGAYVAGSDPMVDQAIQLMPLLEKFLQQDLSDRSSIEATLAMLQQIFPSIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-81 51
escN AAC38383.1 EscN Virulence LEE Protein 4e-73 51
escN AAK26715.1 EscN Virulence LEE Protein 3e-71 50
escN AAL57542.1 EscN Virulence LEE Protein 3e-71 50
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-71 50
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-71 50
escN YP_003236088.1 translocator EscN Virulence LEE Protein 4e-73 50
escN AAC31513.1 L0034 Virulence LEE Protein 2e-73 50
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-73 50
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-73 50
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-73 50
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-74 49
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-74 49
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-65 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-73 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 3e-73 46
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-73 46
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-73 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-73 46
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-71 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 8e-80 45
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-80 45
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-80 45
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 6e-83 45
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-83 45
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-83 45
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-82 45
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-82 45
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-83 45
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 9e-83 45
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 9e-63 45
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 9e-63 45
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 9e-63 45
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 9e-63 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-71 44
escN CAI43874.1 EscN protein Virulence LEE Protein 2e-71 44
invC AAS66861.1 InvC Not tested SSR-2 Protein 4e-61 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 6e-68 43
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 6e-68 43
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-70 42
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-69 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-69 42
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 6e-73 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-66 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 4e-70 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-62 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-62 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 2e-58 42
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-62 41
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 1e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_1753 YP_005027979.1 flagellar protein export ATPase FliI VFG2499 Protein 4e-141 65
Dsui_1753 YP_005027979.1 flagellar protein export ATPase FliI VFG2331 Protein 1e-129 64
Dsui_1753 YP_005027979.1 flagellar protein export ATPase FliI VFG1254 Protein 3e-126 60
Dsui_1753 YP_005027979.1 flagellar protein export ATPase FliI VFG0730 Protein 2e-73 51
Dsui_1753 YP_005027979.1 flagellar protein export ATPase FliI VFG0812 Protein 1e-73 50
Dsui_1753 YP_005027979.1 flagellar protein export ATPase FliI VFG0048 Protein 3e-88 46
Dsui_1753 YP_005027979.1 flagellar protein export ATPase FliI VFG0515 Protein 2e-73 46
Dsui_1753 YP_005027979.1 flagellar protein export ATPase FliI VFG2144 Protein 2e-82 45
Dsui_1753 YP_005027979.1 flagellar protein export ATPase FliI VFG0390 Protein 4e-80 45
Dsui_1753 YP_005027979.1 flagellar protein export ATPase FliI VFG0192 Protein 2e-80 45
Dsui_1753 YP_005027979.1 flagellar protein export ATPase FliI VFG0555 Protein 4e-63 45