Gene Information

Name : Dsui_1561 (Dsui_1561)
Accession : YP_005027791.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1628534 - 1630519 bp
Length : 1986 bp
Strand : -
Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast

DNA sequence :
ATGCAATTCAATCCCCTCACCAGCGCCATCCGTGCCCTCGCCATGGATGCGGTCCAGAAAGCCAATTCCGGTCACCCCGG
CATGCCCATGGGCATGGCCGAAATCGCCGAAGTCCTGTGGCGGCGCCACATGAAACACAATCCGGCCAACCCCAGGTGGG
CCGACCGGGATCGCTTCGTGCTCTCCAACGGCCACGGTTCCATGCTGCTCTACAGCCTGCTGCACCTGACCGGCTACGAC
GTCTCCATCGACGATCTGAAGAACTTCCGCCAGCTGCACAGCAAGACCCCGGGCCACCCGGAAGTGGGCTACACCCCCGG
CATCGAGACCACCACCGGCCCCCTGGGCCAGGGCATCACCAACGCCGTGGGCCTGGCCCTGGCGGAAAAGATCCTGGCGG
CTGAATTCAACCAGCCCGGCCACGACATCGTGGACCACCACACCTACGTCTTCCTCGGCGACGGCTGTCTCATGGAAGGC
GTCTCCCACGAAGCCTGTTCCCTGGCCGGCACCCTGGGCCTGGGCAAGCTGATCGCCTTCTACGACGACAACGGCATCTC
CATCGACGGCCACGTCGAAGGCTGGTTCACCGACGACACCCCGAAGCGCTTCGAAGCCTACGGCTGGCAGGTCATCCCCA
ATGTGGACGGCCACAACGCCACCGCCATCGAGGCCGCCCTGCTGCAGGCCAAGGCCGAAGGCAACAAGCCCACCCTGATC
TGCTGCAAGACCAAGATCGGCATGGGCTCCCCCAACAAGGCCGACAGTCACGACGTGCACGGCGCCCCCCTGGGCGATGC
GGAAATCGCCGCCACCCGGGCCGCCATCGGCTGGAACCACGCCCCCTTCGAAATCCCCGCCGACGTGTACGCCGCCTGGG
ACGGCAAGGCCAAGGGCCAGACCGCCGAAGGCCAGTGGAACGAACGCTTCGCCGCCTACGCTGCCGCTTTCCCGGCCCAG
GCCGCCGAATTCCAGCGCCGCATGGCCGGCAAGCTGCCCGCCAACTGGCAGCAGACGGTGGATGCCTACATCGCCGACAC
CGCCGCCAAGGCCGAAAACATCGCCACCCGCAAGGCCAGCCAGAACGCCATCGCCGCCCTGGTGCCGAACCTGCCGGAAG
TGGTGGGCGGCTCCGCCGACCTGGCCGGCTCCAACCTGACCCTGTGGAAGGCCGCCAAGGGCGTCACCCGCAAGGACGGC
GGCAACTACGTCTATTACGGCGTGCGCGAATTCGGCATGACCGCCATCGCCAACGGCCTGGCCCTGCACGGAGGCCTGAT
CCCCTACACCGCCACCTTCCTGGTGTTCTCCGACTACGCCCGCAACGCCATCCGCATGGCGGCGCTGATGAAGCAGCGCC
AGATCATGGTCTACACCCATGACTCCATCGGCCTGGGCGAGGACGGCCCGACCCACCAGCCGGTGGAACACGTGCCTTCC
CTGCGCCTGATCCCCAACCTGGACGTGTGGCGTCCCGCCGACTCCACCGAGACCGCCGTGGCCTGGGCCAATGCCGTGGA
ACGCCATGACGGTCCTTCCGTCCTGGCCCTGTCCCGCCAGAACCTGCCCAATGTCACCGCCGGCATCAGCGCCGAGACCA
TCCGCCGCGGCGGCTACGTGCTGTCCGAGGCCAAGGGCGAAGCCCAGGTGGTGCTGATCGCCACCGGCTCCGAGATCAAG
CTGGCCCTGGATGCCCAGAAGGCCCTGGGCGACGAGGGCATCGCCGCCCGTGTCGTCTCCATGCCCTGCGTCGAAGCCTT
CGAACGCCAGGACGCCGCCTACCGGGAACAGGTGCTGGGCACCTGCCGCAAGCGCGTCGCCATCGAAGCCGCCCACTCCG
GCCTGTGGCACAAGTACGTGGGCCGTCACGGCGCTGTGGTCAGCATCGACCGCTTCGGCGAGTCCGCCCCCGCCGGCAAG
CTGTTCGAGATGTTCGGCTTCACCGTGGCCAACGTGGTGAAGACCGTCAAGGAAGTGCTGGAATAA

Protein sequence :
MQFNPLTSAIRALAMDAVQKANSGHPGMPMGMAEIAEVLWRRHMKHNPANPRWADRDRFVLSNGHGSMLLYSLLHLTGYD
VSIDDLKNFRQLHSKTPGHPEVGYTPGIETTTGPLGQGITNAVGLALAEKILAAEFNQPGHDIVDHHTYVFLGDGCLMEG
VSHEACSLAGTLGLGKLIAFYDDNGISIDGHVEGWFTDDTPKRFEAYGWQVIPNVDGHNATAIEAALLQAKAEGNKPTLI
CCKTKIGMGSPNKADSHDVHGAPLGDAEIAATRAAIGWNHAPFEIPADVYAAWDGKAKGQTAEGQWNERFAAYAAAFPAQ
AAEFQRRMAGKLPANWQQTVDAYIADTAAKAENIATRKASQNAIAALVPNLPEVVGGSADLAGSNLTLWKAAKGVTRKDG
GNYVYYGVREFGMTAIANGLALHGGLIPYTATFLVFSDYARNAIRMAALMKQRQIMVYTHDSIGLGEDGPTHQPVEHVPS
LRLIPNLDVWRPADSTETAVAWANAVERHDGPSVLALSRQNLPNVTAGISAETIRRGGYVLSEAKGEAQVVLIATGSEIK
LALDAQKALGDEGIAARVVSMPCVEAFERQDAAYREQVLGTCRKRVAIEAAHSGLWHKYVGRHGAVVSIDRFGESAPAGK
LFEMFGFTVANVVKTVKEVLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 65
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 61