Gene Information

Name : Dsui_1462 (Dsui_1462)
Accession : YP_005027698.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1521595 - 1522398 bp
Length : 804 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
GTGAGCGGCGCGGTGGACGGAAGCGCCGCCGCGGGCAGCGTGCTGAACGCTGTCGGCCATCAAGCCGGACTGGGTGCCGG
GACAGGTGACACTGGCAGCGGCACCCCCGCGGCGCCCCTGATCGTCCTCGACAACCTTTCCAAGAGCTACCGCCGGGGCC
AGCAGGTGGTGCCGGTGCTGGAGCGCATCAGCTTCAACATCGCCGCCGGCGAGTTCCTGGCCCTGATGGGGCCGTCCGGT
TCCGGCAAGAGCACCCTGCTCAACCTCATCGCCGGCATCGACCGGCCCGACTCCGGCACCCTCAGCGTCGCCGGCCAGGA
CATCGCCGCCCTGGAAGAGGCCGAGCTGGCGGCCTGGCGGGCGGAAAACGTGGGCTTCATCTTCCAGTTCTACAACCTGA
TGCCGGTGCTGACCGCCCTGGAAAACGTGGAACTGCCCCTGTTGCTGAAAAACCTCGGCAAGGCCGAGCGGCGGGAGCGG
GCCGAACTGGCCCTTTCCATGGTGGGCCTGGCGGACCGCATGGACCACACACCCAACGAGCTTTCCGGCGGCCAGCAGCA
GCGGGTGGCCATCGCCCGGGCCCTCATCACCGACCCCACCCTGATCGTGGCCGACGAACCCACCGGCGACCTGGACCGGG
AGTCGGCCGGCGACATCCTGCACCTCCTGCAGCGCCTCAACGACGAGCTGGGCAAAACCATCGTCATGGTCACCCACGAC
CAGCGGGCGGCGGAATCGGCCCACGCCATCATGCATCTGGAAAAGGGCGAACTCTCCGCCCGCCAGGAAATCCGTCCGCG
CTGA

Protein sequence : 
MSGAVDGSAAAGSVLNAVGHQAGLGAGTGDTGSGTPAAPLIVLDNLSKSYRRGQQVVPVLERISFNIAAGEFLALMGPSG
SGKSTLLNLIAGIDRPDSGTLSVAGQDIAALEEAELAAWRAENVGFIFQFYNLMPVLTALENVELPLLLKNLGKAERRER
AELALSMVGLADRMDHTPNELSGGQQQRVAIARALITDPTLIVADEPTGDLDRESAGDILHLLQRLNDELGKTIVMVTHD
QRAAESAHAIMHLEKGELSARQEIRPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 9e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_1462 YP_005027698.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 4e-42 52
Dsui_1462 YP_005027698.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-38 48
Dsui_1462 YP_005027698.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 7e-39 44
Dsui_1462 YP_005027698.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-36 43