Gene Information

Name : Dsui_0135 (Dsui_0135)
Accession : YP_005026399.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 136563 - 137936 bp
Length : 1374 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain

DNA sequence :
ATGGCTCAGGCCAAAAGTGAACGCCGCGCCAGGGGGGCGCTGGCCCGGGTGCTGGTGGTGGATGACGAAGCGGATATCCG
GGAACTGGTGGACCTCACCCTGTCCCGCATGGGGCTGGCGGCGGATTGCGCCGGCACCGTGGCCGAGGCTCGGGAGTTCC
TTGCCCGGGAGTCTTACCAGCTGTGCCTGACCGACATGCGTTTGCCCGATGGGGAAGGGCTGGAACTGGTGCGCCTCATC
GGCGAGCAGTACAGCGAGACGCCGGTGGCCGTGATCACCGCCTTCGGCAGCACCGAGAACGCGGTGGCGGCCCTCAAGGC
CGGGGCCTTCGACTATCTGGCCAAGCCGGTGGCCCTGGATCAGCTGCGTACCCTGATCAAGTCGGCCATCGATCTGCCGG
TGGCATCCGCGGCCGAGGGGGCGCCCCGCAGCGAGGCTCTGCAGCTGCTCGGCGATTCCCGGGCCATGAGCACGGTGCGG
GAGATCATCGCCAAGCTGGCCCGCAGCCAGGCGCCGGTTTACATCTCCGGCGAATCCGGCTGCGGCAAGGAACTGGCGGC
CCGCCTCATCCACGAGCAGAGCAACCGCAGCCAGGCGCCTTTCGTTCCGGTGAACTGCGGGGCCATCCCCGAGAACCTCA
TGGAAAGCGAGTTCTTCGGTTATCGCAAGGGCGCCTTCACCGGTGCCGAGCAGGATCGGGAAGGATTCTTCCAGGCAGCG
GGGGGCGGCACCCTGTTTCTCGACGAGGTGGCCGACCTGCCCCTGTCCATGCAGGTCAAGCTGCTGCGGGCCATCCAGGA
AAAGCGGGTGCGCAAGGTGGGCGCCACCGTGGAGGAGGCGGTGGATGTGCGCCTCATCTGTGCCACCCACCAGGACCTGA
AGGCCTGCGTCGAGGCCGGCACCTTCCGCCAGGATTTGTACTACCGTCTCAACGTCATCGAGTTGCGCATGCCGCCGCTG
CGGGAGCGGGCCGAGGACATTCCCCAGCTGGCTCGTGCCTGTCTCGACCGTCTGGCCCATCAGGCGTCGGCGTTGCCGCT
GACGTCCGCGGCCGAAGCGGCGCTGTGTCGCTACACCTTCCCCGGCAACGTCCGCGAACTGGAGAATATTCTGGAGCGGG
CCACGGCGCTATGCAGTGGCAGCGAGATCGACGAAGGCGACCTGCAGCTTTCCCTTGCCGATGACGGTCATCCCGATGCC
GGTTCCGAAGGGCGCGGCGGCGAGTCTCTCGATACCTATCTGGACCGTCTGGAGCGCCAGGCGATTCAGGAGGCGGTAGT
TCAGACCCAGGGCAATCGCACGGCGGCGGCGCGCCTGCTCGGCATCACCTTCCGCTCCCTGCGCTATCGCATGGCCCGTC
TGGGGATCGAGTGA

Protein sequence :
MAQAKSERRARGALARVLVVDDEADIRELVDLTLSRMGLAADCAGTVAEAREFLARESYQLCLTDMRLPDGEGLELVRLI
GEQYSETPVAVITAFGSTENAVAALKAGAFDYLAKPVALDQLRTLIKSAIDLPVASAAEGAPRSEALQLLGDSRAMSTVR
EIIAKLARSQAPVYISGESGCGKELAARLIHEQSNRSQAPFVPVNCGAIPENLMESEFFGYRKGAFTGAEQDREGFFQAA
GGGTLFLDEVADLPLSMQVKLLRAIQEKRVRKVGATVEEAVDVRLICATHQDLKACVEAGTFRQDLYYRLNVIELRMPPL
RERAEDIPQLARACLDRLAHQASALPLTSAAEAALCRYTFPGNVRELENILERATALCSGSEIDEGDLQLSLADDGHPDA
GSEGRGGESLDTYLDRLERQAIQEAVVQTQGNRTAAARLLGITFRSLRYRMARLGIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-95 45
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-95 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_0135 YP_005026399.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains BAC0467 Protein 2e-71 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_0135 YP_005026399.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG1214 Protein 3e-126 61
Dsui_0135 YP_005026399.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG0116 Protein 3e-58 41