Gene Information

Name : Dsui_1127 (Dsui_1127)
Accession : YP_005027370.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Unknown
Product : site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1177835 - 1179004 bp
Length : 1170 bp
Strand : +
Note : PFAM: Phage integrase family

DNA sequence :
ATGGCACATGATACCAATCCTACGTTGCGTGAAGCCCTTTTCATGTACTGCGAGCGCATCAGTATCCATAAGAAGGGCCA
CGCACAAGAGAAATATCGAATTAACCTATATTGTCGTTATTCCATTGCTGATCTTCCGATTCGCAATATAACGTCAGTCG
ATGTGGCGACATTTAGGGATGAGCGATTAGCGGAGATTAACGCACGAACGGGTAGGGCACTTTCCCCTGCTACGGTTCGG
CTGGATCTGGCGCTGCTTTCCGACCTGTTTCGCATTGCGAAGAACGAATGGGGTATATGCAACGATAACCCTGTCGCCAA
CGTCCGTAAGCCAAAACTTCCGCCTGGCCGTGATCGACGCTTGGCTCCTCGTGAAGAACGGATGATCATGAGGCATTGTT
CCCAGCGGGGCGCGCATGAGATGAAGGCCATTGTCCAATTGGCATTAGAAACTGCTATGCGTCAGGGGGAGATTCTGGGG
GTGTGCTGGGAGCACATCAATCTGAAATCCAGAATTGTTCATCTGCCCGACACCAAGAATGGTTCCAAACGTGATATCCC
GTTAAGCATGGAGGCTAGGGATATCCTGGCGGCCCAGAGGGTGAAGCTGTCGGGGCGAGTCTTTAGCTATACGAACAACG
GATTGAAGAGCAGTTGGCGAAGCATGATCAAGAGGCTGAATATTCCTGATCTGCATTTCCACGATCTTCGGCACGAAGCA
ATCTCTCGCTTGATGGAACGAGGTGTCTTCAACCTGATGGAAGTTGCTGCCATCAGCGGACACAAGAGCCTGTCCATGCT
GAAGCGATATACGCATCTTCGTGCTCAGCGTTTGGTGCGTAAGCTCGACGCTGGCGCAAACAAGGGGAAGGCTGCGGTCT
TGAGCTACCTGGTTCCTTATCCAGCCTTCATCGAGCCCTATGAGAGCCAGGTAAAAGTAACCTTCCCGGACTTTGACGAT
CTGCATGTGGCAGGGCCATGTCTAAACAGTGCAGTACAGCAAGCTCAGGATGCCCTATTACGGGAAATTTTGGTCTTGAT
GCGTCAAGGTCGGCCGATCCCGCCGCCAAACAACTACCTAGAACTCCTCGATGAATCCAGGCTCTTTCACCTGGACCCGT
TGGCAACCTATGATTCCCTCGCGGATCTTGCCGAGGGCGCGCTGGTTTGA

Protein sequence :
MAHDTNPTLREALFMYCERISIHKKGHAQEKYRINLYCRYSIADLPIRNITSVDVATFRDERLAEINARTGRALSPATVR
LDLALLSDLFRIAKNEWGICNDNPVANVRKPKLPPGRDRRLAPREERMIMRHCSQRGAHEMKAIVQLALETAMRQGEILG
VCWEHINLKSRIVHLPDTKNGSKRDIPLSMEARDILAAQRVKLSGRVFSYTNNGLKSSWRSMIKRLNIPDLHFHDLRHEA
ISRLMERGVFNLMEVAAISGHKSLSMLKRYTHLRAQRLVRKLDAGANKGKAAVLSYLVPYPAFIEPYESQVKVTFPDFDD
LHVAGPCLNSAVQQAQDALLREILVLMRQGRPIPPPNNYLELLDESRLFHLDPLATYDSLADLAEGALV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rci NP_458640.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 4e-82 52
rci NP_807850.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 4e-82 52
rci AAC38070.2 Rci Not tested SPI-7 Protein 3e-82 52