Gene Information

Name : Dsui_1068 (Dsui_1068)
Accession : YP_005027311.1
Strain : Dechlorosoma suillum PS
Genome accession: NC_016616
Putative virulence/resistance : Virulence
Product : heavy metal response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1102435 - 1103112 bp
Length : 678 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator

DNA sequence : 
GTGAAGATACTGGTCGTAGAAGACGAACCCAAAACAGGTGACTATCTGCATAAGGGGCTCTCAGAAGCCGGGTTTGTAGT
GGACCTAGCTCGGGATGGGTTCGATGGACTACATCTGGCCCTAACTGAAGCCTATGACTTGGCCATTCTCGACGTAATGC
TTCCCGGTATTGATGGATGGCAGGTATTGCAAGGAATCCGTAAGGCCGGCAAGGAAATCCCCGTACTTTTCCTTACTGCT
CGCGACTCGGTGGATGACCGGGTCAAAGGCCTAGAACTGGGGGCGGATGATTACCTCGTAAAACCCTTCGCTTTTGCAGA
ACTGCTCGCAAGAGTTAGAACGCTTTTGCGCCGTGGTACAAAGGCCCGCGAGGATGATGTTTTGCGAATTGCAGATCTGG
AACTGGATCTTCGCCGGCGTCGGGTCACTCGTGGAGGGAGAAAGATCGACCTGACATCCAAGGAATTTTCCTTACTGGAA
CTTTTGCTACGCCGACGTGGCGAGGTGCTGCCCCGATCCCTCATCGCATCCCAGGTCTGGGATATGAATTTCGACAGCGA
CACCAATATTATTGAGGTCGCCATTCGTCGCTTGCGGTCCAAAGTGGACGACGGATTCGAGCTAAAGCTGATCCGGACAG
CACGAGGCATGGGGTATGTGCTGGAGGATGGGGAATGA

Protein sequence : 
MKILVVEDEPKTGDYLHKGLSEAGFVVDLARDGFDGLHLALTEAYDLAILDVMLPGIDGWQVLQGIRKAGKEIPVLFLTA
RDSVDDRVKGLELGADDYLVKPFAFAELLARVRTLLRRGTKAREDDVLRIADLELDLRRRRVTRGGRKIDLTSKEFSLLE
LLLRRRGEVLPRSLIASQVWDMNFDSDTNIIEVAIRRLRSKVDDGFELKLIRTARGMGYVLEDGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-47 61
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-46 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_1068 YP_005027311.1 heavy metal response regulator BAC0638 Protein 9e-60 71
Dsui_1068 YP_005027311.1 heavy metal response regulator BAC0197 Protein 6e-54 71
Dsui_1068 YP_005027311.1 heavy metal response regulator BAC0083 Protein 4e-58 70
Dsui_1068 YP_005027311.1 heavy metal response regulator BAC0125 Protein 2e-53 68
Dsui_1068 YP_005027311.1 heavy metal response regulator BAC0111 Protein 5e-57 66
Dsui_1068 YP_005027311.1 heavy metal response regulator BAC0308 Protein 8e-52 65
Dsui_1068 YP_005027311.1 heavy metal response regulator BAC0347 Protein 6e-50 61
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_007622.3794948.p0 Protein 9e-28 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_003923.1003417.p0 Protein 9e-28 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_013450.8614146.p0 Protein 9e-28 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_002951.3238224.p0 Protein 9e-28 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_007793.3914065.p0 Protein 9e-28 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_002758.1121390.p0 Protein 9e-28 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_010079.5776364.p0 Protein 9e-28 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_002952.2859858.p0 Protein 9e-28 41
Dsui_1068 YP_005027311.1 heavy metal response regulator AE015929.1.gene1106. Protein 5e-24 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_002952.2859905.p0 Protein 1e-23 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_002951.3237708.p0 Protein 1e-23 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_007622.3794472.p0 Protein 1e-23 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_002758.1121668.p0 Protein 1e-23 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_009641.5332272.p0 Protein 1e-23 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_013450.8614421.p0 Protein 1e-23 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_007793.3914279.p0 Protein 1e-23 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_003923.1003749.p0 Protein 1e-23 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_002745.1124361.p0 Protein 1e-23 41
Dsui_1068 YP_005027311.1 heavy metal response regulator NC_009782.5559369.p0 Protein 1e-23 41
Dsui_1068 YP_005027311.1 heavy metal response regulator U82965.2.orf14.gene. Protein 1e-18 41
Dsui_1068 YP_005027311.1 heavy metal response regulator AE000516.2.gene3505. Protein 1e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dsui_1068 YP_005027311.1 heavy metal response regulator VFG0596 Protein 1e-47 61
Dsui_1068 YP_005027311.1 heavy metal response regulator VFG1390 Protein 3e-32 46
Dsui_1068 YP_005027311.1 heavy metal response regulator VFG1389 Protein 3e-26 44