Gene Information

Name : VEJY3_02600 (VEJY3_02600)
Accession : YP_005021993.1
Strain :
Genome accession: NC_016613
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator PhoB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 587164 - 587853 bp
Length : 690 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGTCTAGAAGGATTCTGGTTGTTGAAGACGAAGCTCCGATTCGTGAAATGCTCTGCTTCGTACTTGAACAGAAAGGTTA
CCAAGCGGTGGAAGCAGAAGATTACGACACTGCAGTAACCAAACTGGCTGAACCCTTCCCTGATTTAGTTTTACTGGATT
GGATGCTACCAGGCGGTAGCGGTATTAACTTTATCAAGCACATGAAACGTGAAGAGCTGACGCGCAATATTCCTGTAGTC
ATGCTGACGGCGCGTGGCGAAGAAGAAGACAAGGTTCGTGGTTTAGAAGTGGGCGCAGATGATTACATCACTAAGCCTTT
CTCGCCCAAAGAGCTGGTCGCTCGTTTGAAAGCTGTCATCCGCCGTGTCACTCCCACTGCACTAGAAGACGTAATTGACG
TACAAGGCTTGAAGCTTGATCCTGTATCACACCGTGTGACTGCTAATGACGGTGCTGTTGATATGGGTCCGACTGAATTC
AAAATGTTGCACTTCTTCATGACACACCAAGAGCGTGTTTACAGTCGTGAGCAGTTACTGAACAACGTATGGGGCACTAA
CGTGTATGTTGAAGATCGTACGGTTGACGTGCACATCCGTCGTCTACGTAAAGCTTTAGAAGCCGCAGGCCATGATAAAT
TGATTCAAACGGTTCGTGGTGCGGGTTACCGTTTCTCGACTAAGGCATAA

Protein sequence : 
MSRRILVVEDEAPIREMLCFVLEQKGYQAVEAEDYDTAVTKLAEPFPDLVLLDWMLPGGSGINFIKHMKREELTRNIPVV
MLTARGEEEDKVRGLEVGADDYITKPFSPKELVARLKAVIRRVTPTALEDVIDVQGLKLDPVSHRVTANDGAVDMGPTEF
KMLHFFMTHQERVYSREQLLNNVWGTNVYVEDRTVDVHIRRLRKALEAAGHDKLIQTVRGAGYRFSTKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 3e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEJY3_02600 YP_005021993.1 DNA-binding response regulator PhoB HE999704.1.gene2815. Protein 2e-39 44
VEJY3_02600 YP_005021993.1 DNA-binding response regulator PhoB NC_002952.2859905.p0 Protein 1e-37 42
VEJY3_02600 YP_005021993.1 DNA-binding response regulator PhoB NC_013450.8614421.p0 Protein 2e-37 42
VEJY3_02600 YP_005021993.1 DNA-binding response regulator PhoB NC_007793.3914279.p0 Protein 2e-37 42
VEJY3_02600 YP_005021993.1 DNA-binding response regulator PhoB NC_003923.1003749.p0 Protein 2e-37 42
VEJY3_02600 YP_005021993.1 DNA-binding response regulator PhoB NC_002745.1124361.p0 Protein 2e-37 42
VEJY3_02600 YP_005021993.1 DNA-binding response regulator PhoB NC_009782.5559369.p0 Protein 2e-37 42
VEJY3_02600 YP_005021993.1 DNA-binding response regulator PhoB NC_002951.3237708.p0 Protein 2e-37 42
VEJY3_02600 YP_005021993.1 DNA-binding response regulator PhoB NC_007622.3794472.p0 Protein 1e-37 42
VEJY3_02600 YP_005021993.1 DNA-binding response regulator PhoB NC_002758.1121668.p0 Protein 2e-37 42
VEJY3_02600 YP_005021993.1 DNA-binding response regulator PhoB NC_009641.5332272.p0 Protein 2e-37 42
VEJY3_02600 YP_005021993.1 DNA-binding response regulator PhoB AE000516.2.gene3505. Protein 8e-33 41