Gene Information

Name : VEJY3_02535 (VEJY3_02535)
Accession : YP_005021980.1
Strain :
Genome accession: NC_016613
Putative virulence/resistance : Virulence
Product : ClpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 567306 - 569879 bp
Length : 2574 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGCGTCTTGATAGATTCACAAGTAAGTTTCAAATCGCTATCTCTGATGCTCAATCATTAGCGTTGGGGCGCGATCATCA
ATATATAGAGCCAGTTCACCTGATGGTGGCTTTGCTTGATCAAAATGGCAGTCCAATTCGTCCATTGCTGACAATGTTGG
ATGTGGACGTGACACATTTACGCTCTAAGTTGAGCGAAATCCTTGATCGATTACCAAAAGTCAGCGGCATTGGTGGTGAT
GTGCAGCTTTCGGGTGCAATGGGGACTTTGTTCAATCTTTGTGACAAAGTCGCTCAAAAACGCCAGGACTCGTATATTTC
GTCTGAAATCTTCCTCCTAGCCGCCATTGAAGATAAAGGTCCGCTTGGTCAATTATTGAAAGAAGTCGGTTTAACCGAGC
AGAAAGTAAGCCAGGCGATCGAAAAGATCAGAGGTGGTCAAAAGGTCGATGATCCGAATGCGGAAGAGCTTCGTCAGGCT
TTGGAAAAGTTCACCATAGACCTTACCGAAAGAGCAGAGCAGGGTAAGTTGGATCCGGTGATTGGCCGTGATGATGAAAT
CCGTCGTACGATCCAAGTTCTGCAACGTCGCACCAAGAATAACCCGGTTATCATTGGTGAACCTGGTGTGGGTAAAACAG
CGATCGTTGAAGGTCTGGCACAGCGCATTATTAACAATGAAGTGCCAGAAGGTTTACGTGGTCGTCGAGTGCTCGCGTTA
GATATGGGCGCACTGGTTGCCGGTGCAAAATACCGAGGTGAGTTCGAAGAGCGCTTGAAATCAGTATTGAATGAGTTAGC
CAAAGAAGAAGGCAACATCATTCTGTTTATTGATGAGCTGCATACCATGGTGGGCGCTGGTAAAGGTGAAGGGTCTATGG
ATGCGGGTAACATGCTGAAACCAGCATTGGCTCGCGGTGAACTTCACTGTGTTGGTGCGACAACATTGGACGAATACCGT
AAGTACATTGAGAAAGACGCGGCATTAGAGCGTCGTTTCCAAAAAGTGCTGGTGGATGAGCCAACCGTTGAAGATACGGT
CGCCATTTTACGTGGTTTGAAAGAGCGTTATGAGCTGCATCACCATGTAGAAATTACCGACCCGGCTATCGTTGCGGCAG
CAAGTTTGTCACATCGATACGTTTCTGATCGTCAATTACCTGATAAGGCGATCGACTTAATCGATGAGGCGGCATCAAGC
ATTCGTCTGCAAATCGATTCGAAACCAGAGTCTTTGGATAAGCTTGAGCGTAAAATCATTCAGTTAAAAATTGAGCAGCA
AGCGTTAAGTAACGAGCATGATGAAGCGAGTGAAAAGCGCCTGACGACTTTAAATGAAGAGTTGACTGAAAAAGAGCGCG
AATATGCTGAGTTAGAAGAGGTATGGAATACAGAAAAAGCAGCACTATCGGGTACGCAACACATTAAATCCGAGCTTGAG
CAAGCACGGATGGATATGGAGTTTGCTCGCCGTGCTGGTGATCTAAACCGTATGTCTGAGTTGCAATACGGTCGTATTCC
TGAGCTGGAAAAACAGTTGGACTTGGCTGCACAAGCCGAAATGCAAGAGATGACGTTGTTGCGTAACAAAGTTACCGATA
ACGAAATCGCGGAAGTGCTGTCCAAACAAACGGGCATTCCGGTCTCGAAGATGCTCGAAGCAGAGAAAGAAAAACTGCTT
CGCATGGAAGATGTATTGCATCAACGTGTTATTGGCCAGGTGGAAGCGGTTGAAGTGGTTGCGAATGCGATTCGCCGTAG
CCGTGCCGGGTTGTCGGATCCAAACCGACCAATTGGCTCTTTCTTGTTCTTAGGTCCAACGGGTGTGGGTAAAACCGAGT
TGTGTAAAACACTGGCAAACTTCATGTTTGATAGTGAAGACGCAATGGTGCGTATTGATATGTCTGAGTTTATGGAGAAA
CACTCTGTAGCGAGACTGGTTGGTGCGCCTCCGGGTTACGTTGGCTATGAAGAGGGCGGTTATCTGACAGAAGCGGTTCG
TCGCAAACCTTATTCGGTCATTCTATTGGATGAGGTAGAAAAAGCGCACCCAGATGTGTTCAACATTCTGCTTCAAGTGC
TGGATGACGGGCGTCTGACTGATGGCCAAGGTCGTACGGTTGATTTCCGTAACACTGTGGTGATCATGACTTCAAACTTA
GGCTCTTCGAGAATTCAGGAAAACTTCGCAATACTGGATTATCAAGGCATTAAGAATGAAGTTATGGAAGTGGTCAGCAA
ACACTTCCGCCCTGAGTTCTTGAACCGTGTTGATGAAACCGTGGTATTCCATCCACTTGGTAAAGAGCACATTAAGTCGA
TTGCTTCCATTCAGTTGGAACGTCTGCATAAACGTCTGGCTGAGAAAGACTACGATCTGGAAGTCGGTGACGAGGCGTTA
GAGTTGATCGCACAAGTCGGCTTTGACCCGGTGTATGGCGCACGTCCTTTGAAACGTGCAATTCAACAAAATGTTGAAAA
CCCACTAGCGAAATCGATTCTCTCTGGGCAGTTCTTGCCAGGAAAACCGATTGTGCTGGGTGTCAAAGACGGCAATATCA
TCGCCAACCAATAG

Protein sequence :
MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLDVDVTHLRSKLSEILDRLPKVSGIGGD
VQLSGAMGTLFNLCDKVAQKRQDSYISSEIFLLAAIEDKGPLGQLLKEVGLTEQKVSQAIEKIRGGQKVDDPNAEELRQA
LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLAL
DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYR
KYIEKDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS
IRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEKRLTTLNEELTEKEREYAELEEVWNTEKAALSGTQHIKSELE
QARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLL
RMEDVLHQRVIGQVEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEK
HSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSSRIQENFAILDYQGIKNEVMEVVSKHFRPEFLNRVDETVVFHPLGKEHIKSIASIQLERLHKRLAEKDYDLEVGDEAL
ELIAQVGFDPVYGARPLKRAIQQNVENPLAKSILSGQFLPGKPIVLGVKDGNIIANQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-163 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEJY3_02535 YP_005021980.1 ClpB protein VFG2084 Protein 1e-105 41