Gene Information

Name : xerD (VEJY3_02300)
Accession : YP_005021933.1
Strain :
Genome accession: NC_016613
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 513614 - 514531 bp
Length : 918 bp
Strand : +
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGACAGCACAGCTGCCTGTCAATCAACAAGATTTTGCTTTTGTGGAGCAATTCTTAGACGCGATGTGGATGGAGCGAGG
ACTGTCTGAGAACACGCTAGCTTCATACCGAAATGATCTAATTAAACTTCTTACCTGGATGGAGCAACAGCGTTACCGTC
TCGATTTTATAAGCTTAGCTGGCCTTCAAGAGTATCAAAGCTACTTGGTCGATTTAGATTACAAACAGACTTCCCGTGCA
CGAATGTTATCGGCGATTCGCCGTCTGTTTCAGTATCTTCATCGCGAAAAAGTACGCGCCGATGACCCTAGCGCATTGTT
AGTCAGCCCTAAACTACCGCAGCGTTTACCGAAAGACATCAGCGAAGAGCAAGTCGATGCTTTACTGGATGCGCCTGACC
CTAATGACCCGGTAGAATTGCGCGATAAAGCGATGTTAGAGTTACTTTACGCGACAGGGCTTCGTGTTACTGAACTGGTA
AGCCTGACGATGGAAAACGTCAGTTTGCGTCAGGGCGTGGTCCGAGTGACGGGTAAGGGTGGCAAAGAGCGCTTGGTGCC
GATGGGTGAGAACGCCGTGGACTGGATTGAAACTTTTATTCAGCAAGGTCGGCCAGCATTGCTGGGAGAGACCTCTTCGG
ATGTGGTTTTCCCAAGTAAACGCGCACGGCAAATGACTCGTCAGACGTTCTGGCATCGTATTAAATACTATGCTGTGATA
GCGGGAATCGATACCGATCAATTATCGCCGCATGTGTTACGTCACGCGTTTGCAACACATTTACTGAACTATGGCGCAGA
TCTCAGGGTCGTACAGATGCTACTAGGGCATAGTGACTTATCGACCACGCAAATTTATACTCACGTGGCGACTGAACGAC
TGAAGCAGATCCACAGTCAACACCACCCAAGAGCATAG

Protein sequence :
MTAQLPVNQQDFAFVEQFLDAMWMERGLSENTLASYRNDLIKLLTWMEQQRYRLDFISLAGLQEYQSYLVDLDYKQTSRA
RMLSAIRRLFQYLHREKVRADDPSALLVSPKLPQRLPKDISEEQVDALLDAPDPNDPVELRDKAMLELLYATGLRVTELV
SLTMENVSLRQGVVRVTGKGGKERLVPMGENAVDWIETFIQQGRPALLGETSSDVVFPSKRARQMTRQTFWHRIKYYAVI
AGIDTDQLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQIHSQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 7e-56 57
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 7e-56 57