Gene Information

Name : VEJY3_13170 (VEJY3_13170)
Accession : YP_005024089.1
Strain :
Genome accession: NC_016613
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2940931 - 2943492 bp
Length : 2562 bp
Strand : +
Note : COG0249 Mismatch repair ATPase (MutS family)

DNA sequence :
GTGAAAGCTGAACAAAAACACACTCCGATGATGCAGCAATACCTCAAGCTAAAGGCTGAGAACCCTGATATTTTGCTGTT
TTACCGCATGGGCGATTTCTACGAGCTCTTCTATGATGATGCTAAGCGAGCCTCTCAACTGCTTGATATCTCATTGACTA
AACGTGGTGCATCTGCAGGAGAGCCTATTCCTATGGCGGGTGTGCCATTTCATGCCGTAGAAGGCTATTTGGCCAAACTT
GTTCAGCTTGGTGAGTCTGTTGCAATCTGTGAGCAGATCGGTGATCCCGCGACCAGTAAAGGCCCTGTTGAGCGCAAAGT
CGTGCGCATTGTTACTCCGGGTACCGTCACTGACGAAGCTCTTCTCTCTGAGCGCCTCGATAACTTGATTGCGGCGATTT
ATCACCACAACGGTAAGTTTGGTTACGCGACGCTGGATGTCACTTCAGGCCGTTTTCAATTAACGGAACCTGAAACCGAA
GAGGCAATGGCGGCTGAACTGCAACGCACCGCACCACGTGAGTTATTGTTTCCTGAAGATTTTGAACCCGTCCATTTGAT
GTCGAGCCGCAACGGTAACCGTCGTCGTCCGGTATGGGAATTTGAATTAGATACCGCGAAACAACAACTGAATCAGCAAT
TCGGTACCAAAGATTTGATTGGCTTTGGCGTAGAACACGCGTCACTCGGATTATGTGCCGCAGGTTGTTTGATCCAGTAT
GTAAAAGACACCCAGCGTACTGCGCTACCGCACATTCGTTCTTTGACTTTTGATCGTCAGGATCACTCAGTTATTCTGGA
TGCCGCCACGCGTCGTAACCTCGAAATTACTCAAAACCTTGCAGGCTCGACAGACAATACGTTGGCCGCAGTTCTCGATC
ACTGTGCAACCCCAATGGGTAGCCGCATGCTCAAGCGTTGGCTCCATCAACCAATGCGCTGCATCGACACATTAAACAAT
CGCCTCGATGCCATCGGCGAAATTAAAGACCAAAGCCTATTTGCCGATCTTCAGCCCACTTTAAAGCAGATTGGTGATAT
TGAGCGAATTTTAGCCCGTCTGGCGTTACGTTCTGCCCGCCCTCGTGACATGGCTCGTCTGCGTCACGCTATGCAGCAAT
TGCCAGAGCTAGAAGCCATTACTGCCTCACTGACTCATCCATACCTCGTGAAGCTGGCTCAGTTTGCAGCACCAATCGAT
GATGTGTGCGAATTACTCGAACGTGCAATCAAAGAAAACCCTCCTGTTGTGATTCGCGACGGTGGCGTTATCGCCGAGGG
ATATAATGAGGAGCTGGATGAGTGGCGTAAACTCGCTGATGGCGCAACAGAATACTTAGAAAAACTCGAATCGGATGAAC
GTGAGCGTCATGGCATTGATACGCTTAAAGTTGGTTACAACAATGTGCATGGCTTCTACATTCAGGTTAGCCGTGGTCAA
AGCCATTTGGTACCGCCACACTATGTGCGTCGCCAAACCCTTAAAAACGCAGAACGCTACATCATTCCTGAGCTGAAAGA
ACACGAAGACAAAGTGCTTAACTCTAAGTCAAAAGCACTCGCGTTAGAAAAGCAGCTTTGGGAAGGGCTGTTTGATCTGT
TGATGCCGAACCTAGAACAGTTACAGAATTTGGCCTCTGCGGTTTCTCAATTGGATGTACTACAAAACCTGGCAGAACGT
GCTGATTCACTCGATTACTGCCGTCCGACATTGGTCAAAGAACCGGGTATCCAAATCCAATCGGGTCGCCACCCTGTTGT
AGAGCAAGTCACCAGTGACCCATTTATCGCCAACCCAATAGAGCTCAACCCACAGCGTAAGATGTTGATCATTACGGGTC
CGAACATGGGTGGTAAATCGACATACATGCGCCAAACTGCATTGATCGCGCTAATGGCTCACATCGGTTCGTACGTTCCA
GCTGAATCAGCTCAGATTGGGTCGTTAGATCGTATTTTCACTCGTATTGGTGCTTCTGATGACTTAGCCTCAGGGCGATC
AACGTTTATGGTGGAAATGACGGAAACAGCGAACATTCTGCACAACGCAACGAAAAACAGCTTAGTACTTATGGATGAGA
TTGGTCGAGGCACCAGTACTTATGATGGTCTGTCTTTGGCATGGGCAAGCGCAGAATGGCTGGCAACACAAATCGGCGCG
ATGACACTGTTCGCCACCCACTACTTTGAGCTGACTGAACTACCAAGCCAGTTGCCAAATCTGGCCAACGTCCACTTAGA
CGCGGTCGAGCATGGAGACAGCATTGCGTTTATGCACGCAGTTCAAGAAGGTGCAGCCAGCAAATCATACGGTCTTGCGG
TTGCTGGCTTGGCTGGTGTCCCAAAAACCGTGATCAAAAATGCGCGCGCGAAGTTATCTCAACTTGAACAGTTAAGTCAT
GGTAACGACTCCCCTCGCCCGGGAGCGGTCGATGTGGCGAATCAGCTCAGCCTTATTCCTGAGCCAAGCGAAGTGGAGCA
AGCTTTATCAAACATCGATCCCGATGAGATGACGCCTCGCCAGGCACTTGAAGAACTGTATCGTTTGAAAAAAATGCTTT
AG

Protein sequence :
MKAEQKHTPMMQQYLKLKAENPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPFHAVEGYLAKL
VQLGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDEALLSERLDNLIAAIYHHNGKFGYATLDVTSGRFQLTEPETE
EAMAAELQRTAPRELLFPEDFEPVHLMSSRNGNRRRPVWEFELDTAKQQLNQQFGTKDLIGFGVEHASLGLCAAGCLIQY
VKDTQRTALPHIRSLTFDRQDHSVILDAATRRNLEITQNLAGSTDNTLAAVLDHCATPMGSRMLKRWLHQPMRCIDTLNN
RLDAIGEIKDQSLFADLQPTLKQIGDIERILARLALRSARPRDMARLRHAMQQLPELEAITASLTHPYLVKLAQFAAPID
DVCELLERAIKENPPVVIRDGGVIAEGYNEELDEWRKLADGATEYLEKLESDERERHGIDTLKVGYNNVHGFYIQVSRGQ
SHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALALEKQLWEGLFDLLMPNLEQLQNLASAVSQLDVLQNLAER
ADSLDYCRPTLVKEPGIQIQSGRHPVVEQVTSDPFIANPIELNPQRKMLIITGPNMGGKSTYMRQTALIALMAHIGSYVP
AESAQIGSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVLMDEIGRGTSTYDGLSLAWASAEWLATQIGA
MTLFATHYFELTELPSQLPNLANVHLDAVEHGDSIAFMHAVQEGAASKSYGLAVAGLAGVPKTVIKNARAKLSQLEQLSH
GNDSPRPGAVDVANQLSLIPEPSEVEQALSNIDPDEMTPRQALEELYRLKKML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEJY3_13170 YP_005024089.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 72