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Name : VEJY3_13030 (VEJY3_13030) Accession : YP_005024061.1 Strain : Genome accession: NC_016613 Putative virulence/resistance : Virulence Product : type IV pilus assembly protein PilB Function : - COG functional category : - COG ID : - EC number : - Position : 2909708 - 2911393 bp Length : 1686 bp Strand : + Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGTATACCAACCTCTCAACGATTCTCCGCCAGTCAGGATTACTAAATCAATACCAAGAAGAATCGTTAATAGAGCAAGT CAACGCTTCTGGTATTTCAATGCCGGAAGCGTTAGTCAATTCTGGTATATTCACGACTAGCGAACTCGCGACTCACCTTA ATTCAATCTTTGGTTTACCCTGCGAATCCTTATCTCACTATGATTACACCGCCCTGTGCCAAAAATTGGGGCTGCGTGAA CTGATCACGAGTCATCATGCATTGCCACTGGAGCGAACGCCTTCGACGTTAACTCTCGCCATTGCCGACCCAACGAACCA ACAAGCTGAAGATGATTTTCGCTTTGCTACCGGATTACAAGTCGACTTAGTTATCGCTGATTTTTCGGAGCTTGATGCTG CGATTCGCCGTTTGTACGGTCGTGCGTTAGGTCAGGAAAAATCGGGCTTAAAAGAGATCAACCAAGAAGAATTGGCTAAT TTGGTTGACGTCGGTGCTGATGAAATCGATAACATCGAAGACTTAAGTCAGGACCAATCACCGGTTAGTCGCTATATCAA CCAAATTTTGCTTGATGCGGTACGTAAAGGCGCATCCGATATCCACTTTGAGCCCTATGAAAAAATGTATAGAGTTCGCC TCCGTTGCGACGGTATTCTGATTGAGACTCAACAGCCGCCAAACCATTTAAGTCGACGCTTATCAGCGCGAATCAAAATT CTGTCCAAGCTTGATATTGCTGAAAGGCGCATGCCGCAAGACGGTCGAATCAAGTTAAAGCTTAATCAAGACACTGCGAT TGATATGCGAGTGTCCACCTTACCCACTCTATTCGGAGAAAAAATCGTATTACGACTGCTCGACAGCAGTTCAGCTTCTC TGGATATAGATAAACTAGGCTACAGTGACCAGCAAAAGCAGCTGTACTTAGATGCTCTGCGTCGTCCACAAGGCATGATT TTAATGACCGGCCCAACCGGCAGCGGCAAAACCGTCTCGTTGTACACAGGGCTGAGCATACTCAATAAACCAGAGATAAA TATTTCTACGGCTGAAGACCCGGTCGAAATTAACCTCTCCGGAATTAATCAGGTTCAGGTTCAACCCAAGATAGGCTTTG GTTTCGCGGAGGCACTGCGCTCTTTCCTGCGTCAAGACCCTGATGTGGTCATGGTGGGAGAAATCCGCGATTTGGACACA GCAGAAATCGCGATTAAGGCCTCACAAACCGGACACTTAGTCTTGTCGACACTCCACACAAATTCAGCCGCTGAAACCGT TATCCGCCTAACGAATATGGGCGTTGAAAGCTACAACCTCGCCTCGTCGCTCAGCCTTATTATTGCCCAGCGCTTAGCCC GTAAACTTTGCCCGCACTGTAAACAACCTCAAGAGGTTACCGCCGCATTACAACATATTGGCATTAACGCAACTGACCAG ATTTATCAAGCCAACCCAAATGGCTGCAACCACTGTACACACGGCTATTCGGGACGAACTGGCATCTATGAGGTGATGCG TTTCGATGAAAATCTATCCGAAGCACTGATTAAAGGAGCCTCGGTACATCAACTGGAAAAACTCGCCATCCGTAACGGGA TGAGCACACTACAAATGTCAGGTATTGAAAAGCTTAAGCAAGGCGTCACAAGCTTTAGCGAACTGCAGCGCGTGCTCTAC TTTTAA Protein sequence : MYTNLSTILRQSGLLNQYQEESLIEQVNASGISMPEALVNSGIFTTSELATHLNSIFGLPCESLSHYDYTALCQKLGLRE LITSHHALPLERTPSTLTLAIADPTNQQAEDDFRFATGLQVDLVIADFSELDAAIRRLYGRALGQEKSGLKEINQEELAN LVDVGADEIDNIEDLSQDQSPVSRYINQILLDAVRKGASDIHFEPYEKMYRVRLRCDGILIETQQPPNHLSRRLSARIKI LSKLDIAERRMPQDGRIKLKLNQDTAIDMRVSTLPTLFGEKIVLRLLDSSSASLDIDKLGYSDQQKQLYLDALRRPQGMI LMTGPTGSGKTVSLYTGLSILNKPEINISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLDT AEIAIKASQTGHLVLSTLHTNSAAETVIRLTNMGVESYNLASSLSLIIAQRLARKLCPHCKQPQEVTAALQHIGINATDQ IYQANPNGCNHCTHGYSGRTGIYEVMRFDENLSEALIKGASVHQLEKLAIRNGMSTLQMSGIEKLKQGVTSFSELQRVLY F |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-76 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-76 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VEJY3_13030 | YP_005024061.1 | type IV pilus assembly protein PilB | VFG0112 | Protein | 5e-125 | 50 |
| VEJY3_13030 | YP_005024061.1 | type IV pilus assembly protein PilB | VFG2048 | Protein | 4e-78 | 49 |
| VEJY3_13030 | YP_005024061.1 | type IV pilus assembly protein PilB | VFG1880 | Protein | 3e-113 | 48 |
| VEJY3_13030 | YP_005024061.1 | type IV pilus assembly protein PilB | VFG0233 | Protein | 3e-96 | 44 |
| VEJY3_13030 | YP_005024061.1 | type IV pilus assembly protein PilB | VFG0182 | Protein | 6e-81 | 44 |
