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Name : VEJY3_11755 (VEJY3_11755) Accession : YP_005023808.1 Strain : Genome accession: NC_016613 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : - COG ID : - EC number : - Position : 2610213 - 2613440 bp Length : 3228 bp Strand : - Note : COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases DNA sequence : GTGATAACAGAAGACCAACTAGAACAACAATGCCTCGATTGGTTTAAAGAGCTAGGCTACCAATACCAAAATGGCTATGA CATCGCACCGGATGGAAACACACCCGAGCGTGAAAACTACCAGCAAGTCACGCTGCAAGCACGTTTAGTCTCTGCCTTGG AAACCTTAAACCCTAATGTACCCAGTGACACTTTAATCGAAGTGGCTAAAACCGTTGCTACGCCGCAAACGCCAATCCTG ATCAAAAACAACAAAGCTTTTCATCAATATTTAATTGAGGGTGTGCCCGTTGAATACTCGGTGATGGAGCACGAACAATG GGTGACTAAGCATACTCATGTTCGATTAATTGACTTTGACGACCGTGAGAATAACGAATTCTTAGTGGTCAATCAGTTCA CTATCACGGGTACCAAAGTCAATCGTAGACCCGATGTAATCGTCTTTATCAATGGCTTGCCGATGGCGGTCATCGAACTG AAAAATCCCGCCGATGATCACGCCGATATCTGGAATGCCTACAATCAAATTCAAACTTATAAAGAAGAAATCGCTGATCT CTTTGTGTTCAATGAAGCTCTGGTCATTTCTGATGGCTGGACGGCACGAGTCGGCTCGTTAACGGCTAATAAAGAGCGTT TCCTGCCATGGAAAACCATTGAGGACGAAGACGATAAGCCGTTACTCGAATTCCAATTAGAGACCATGGTGCGTGGCTTC TTTAAGCCAGAATTGCTGCTCGATTACATTCGCTACTTCGTATTGTTCGAAAATGATGGCGACAAGATCATCAAAAAAAT CGCAGGTTATCACCAATTCCATGCCGTACGTGCTGCGGTGAAAGCGACTGTCATCGCGGCCACAACCTCTGACCAAGTCA CCGAACCACGAGCCAACTATGCCAATACCGTGGTGCCCGGAAGCAAAAAAGCAGGCGTGGTTTGGCATACCCAAGGCAGC GGGAAAAGCATTTCGATGGTCTGCTACGCGAGTAAGTTACTTCAACAGCCGGAGATGAACAACCCAACCTTAGTGGTGGT GACTGACCGTAATGACTTAGACGGTCAGCTATTTAATACCTTCACGATGGCGCAGGAAACGCTAAAACAGATCCCTCAGC AGGCAGAAGACCGTGACTCATTGCGCGATTTACTGCTCAATCGTCAGTCCGGTGGCATCATCTTCACTACTGTGCAGAAG TTTGCTTTACTCGACGAAGAAATGGCACATCCTATCCTTTCTGAACGCTCGAATATCGTGGTAGTTTCCGATGAGGCACA CCGTAGCCAGTATGGCAATAAAGCTCGCCTAGTAGATGTTAAAAACGAAGGTGGCAATGTGGTTGATCAGCGTTATGTTT ATGGTTACTCCAAATACATGCGTGACGCGCTGCCAAATGCCGCTTTTATTGGTTTTACAGGTACACCAATATCAATGGAT GATAAAGACACTCGCGGTGTCTTTGGTGATTATGTTTCTATCTACGATATTCAAGACGCGGTCGATGATGGCGCGACAGT GCCGATTTACTACGAATCCCGATTAGCCAAGCTCGATATTAATCAAGATGAAATCGAAGCGCTTAACGATCAGGTCGAAG AGGAAATAGGCGAAGACGAAGAAACGGAAAGTCGCGAGAAAATAAAATCGCAGTGGTCAGCACTTGAGAAACTGGTTGGT GCAGAGCCACGTATCAAACAGGTAGCGAAAGATCTAGTCGAGCACTTTACCACCCGCTGTGAAACCTTTCCGGGCAAGGC GATGATTGTTGCCATGAGTCGCGAGATTTGTGTCGATTTATACGATGCCATTGTGGCTATCAAACCCGAATGGCATAGCG ATGATCCAAACAAAGGCGCGATCAAAATTGTTATGACAGGCAGCGCCGCTGATAAAGCCAAAATGCAGCCGCACATTCAT GATAAAAAAACCAAGAAGCTGTTCGAGAAACGTTACAAAGATACCGATGACGAATTGCAATTGGTTATTGTGCGCGATAT GTGGTTAACAGGTTTTGATGCGCCTTGTTGTCATACCATGTATATCGACAAGCCAATGAAAGGTCATAACCTGATGCAGG CGATAGCGCGTGTGAATCGTGTATTTAAGGATAAGCCCGGAGGTTTGGTTGTTGACTATATTGGTATTGCCAATGAGCTT AAAAACGCACTTAAGACCTATACCAACAGTCAAGGGAAAGGTCAGCCTACCGTCGACACCGCCGAGGCTTTCGCTGTCTT CATGGAAAAAATAGACGTGATTCGCGGAATGTTTGCCACTCCCGTCGATGGTGATGTATTAAATTATCGTCCAGATTTTG AAACCAAACCACTGCAACTGCTTCCGGGAGCCGTGAACCATATATCTGGTCTCTCACACCGGAACAGCAAAGGCGAAGAA GTTCGTGATGGTAAACGCCGTTTCCTTGATGTCATGGCTGCACTGATGAAAGCGTTCTCGCTATGTAATACCTTGGATGA AGTGGACGGCTATAAGAGCGAAATTGCCTTTTATGGAGCGATTAAAACAGCATTCCTAAAACATTCTACGGTTGACAAAA AACGCAGCGACGAACTACGCAACTCTGCTTTGCGCCAGATCCTCAACAATGCCATTGTGGCAGATGGAGTCGATGACATC TTCAAAACCGTTGGCTTAGATAAACCTAATATCGGTTTGCTATCGGAAGAGTTTCTCGAAGATGTAAAACATATGAAGGA GAAGAACCTCGCGGTCGAGTTACTGGAAAAATTACTGCGTGATGAAGTCAAAGCACGGATGAAAAACGATGTGGTGCAAG AGAAGAAATTCTCGGAACGCATTATGTCGACGCTGCAAAAATACCATAACCGCAGTATCGAAACCGCACAGGTAATTGAA GAGCTGATCCAGTGGGCTAAAGAGATGCAAGCCGACGCTGAGATGATGGATAAGCTCAACCTGTCTACTGATGAAATTGC GTTTTACCGTGCATTAGTCACCAACGAAGCCTCCGTGCGAACCCTAGGCGATGACAACCTACGCCAACTAGCAATTGAAC TCACTCACCAACTGCGTAAATCCGCTACGGTAGACTGGCAGAAACGAGAAAGCGTGCGTGCACGGATGCGCAACCTTGTA CGTCGTCTACTGCGTCGCTGGAAATATCCACCTGATGCGGCTGAAGAGGCGATTAAGCTGGTTCTGGATCAAGCTGAAGT ACTGGCTGATGGATGGTATGCGGCTTAA Protein sequence : MITEDQLEQQCLDWFKELGYQYQNGYDIAPDGNTPERENYQQVTLQARLVSALETLNPNVPSDTLIEVAKTVATPQTPIL IKNNKAFHQYLIEGVPVEYSVMEHEQWVTKHTHVRLIDFDDRENNEFLVVNQFTITGTKVNRRPDVIVFINGLPMAVIEL KNPADDHADIWNAYNQIQTYKEEIADLFVFNEALVISDGWTARVGSLTANKERFLPWKTIEDEDDKPLLEFQLETMVRGF FKPELLLDYIRYFVLFENDGDKIIKKIAGYHQFHAVRAAVKATVIAATTSDQVTEPRANYANTVVPGSKKAGVVWHTQGS GKSISMVCYASKLLQQPEMNNPTLVVVTDRNDLDGQLFNTFTMAQETLKQIPQQAEDRDSLRDLLLNRQSGGIIFTTVQK FALLDEEMAHPILSERSNIVVVSDEAHRSQYGNKARLVDVKNEGGNVVDQRYVYGYSKYMRDALPNAAFIGFTGTPISMD DKDTRGVFGDYVSIYDIQDAVDDGATVPIYYESRLAKLDINQDEIEALNDQVEEEIGEDEETESREKIKSQWSALEKLVG AEPRIKQVAKDLVEHFTTRCETFPGKAMIVAMSREICVDLYDAIVAIKPEWHSDDPNKGAIKIVMTGSAADKAKMQPHIH DKKTKKLFEKRYKDTDDELQLVIVRDMWLTGFDAPCCHTMYIDKPMKGHNLMQAIARVNRVFKDKPGGLVVDYIGIANEL KNALKTYTNSQGKGQPTVDTAEAFAVFMEKIDVIRGMFATPVDGDVLNYRPDFETKPLQLLPGAVNHISGLSHRNSKGEE VRDGKRRFLDVMAALMKAFSLCNTLDEVDGYKSEIAFYGAIKTAFLKHSTVDKKRSDELRNSALRQILNNAIVADGVDDI FKTVGLDKPNIGLLSEEFLEDVKHMKEKNLAVELLEKLLRDEVKARMKNDVVQEKKFSERIMSTLQKYHNRSIETAQVIE ELIQWAKEMQADAEMMDKLNLSTDEIAFYRALVTNEASVRTLGDDNLRQLAIELTHQLRKSATVDWQKRESVRARMRNLV RRLLRRWKYPPDAAEEAIKLVLDQAEVLADGWYAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 63 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 46 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 45 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 45 |
