Gene Information

Name : fliP (VEJY3_11530)
Accession : YP_005023763.1
Strain :
Genome accession: NC_016613
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2567575 - 2568444 bp
Length : 870 bp
Strand : -
Note : COG1338 Flagellar biosynthesis pathway, component FliP

DNA sequence :
ATGACCAACGCTAACCCAATTCGTCTCATCATGAGCACCTTTATTTTGCTGGCGAGCGTACTGTTTTCTTCACTTTCGTT
TGCTCAGGTGGAGGAGTCTTCACTGCCTGCTAATTTGGCAGAAGGGAACAGCGTAACCGTTCAGGCGATGCAGACTGATA
CAGGCGCTAGCCGCACGATGTCGGTCACCAATAGCGGTGGAATACCAGCGTTTACCATGACCACCAATTCGGATGGTAGC
GAAGATTATTCCATCACGCTGCAAATCCTCGCCTTAATGACCATGCTTGGCTTCTTGCCAGCAATGGTGATTTTGATGAC
GTCATTTACGCGAATTGTCGTGGTCATGTCGATTCTTCGTCAGGCGATGGGCCTGCAACAAACGCCTTCCAATCAGGTGA
TCATTGGTATCGCACTTTTCCTTACTTTCTTTGTGATGTCACCGGTGCTAAACGAGATAAACGATACCGCCATTCAACCT
TATTTGAATGAGCAAGTGACTGCCAGAGAAGCGTTTGATGCCGCGCAGGTGCCAATAAAAGCCTTTATGCTCAAACAGAC
TCGAATTAAAGACCTAGAAACCTTCGTCAATATGTCGGGCGAGCAGGTGACAAACCCAGAAGACGTTTCTATGGCTGTAC
TGATTCCGGCGTTTATTACCTCTGAGCTGAAAACCGCCTTCCAAATTGGCTTTATGTTGTTCTTGCCGTTTTTGATCATC
GACCTTGTCGTCGCTTCAGTACTTATGGCGATGGGTATGATGATGTTGTCACCGATGATTGTATCGTTGCCGTTTAAGCT
GATGTTATTCGTGCTGGTGGATGGCTGGAATTTGATACTGTCGACGCTCGCCGGCAGTTTTGCCCTGTGA

Protein sequence :
MTNANPIRLIMSTFILLASVLFSSLSFAQVEESSLPANLAEGNSVTVQAMQTDTGASRTMSVTNSGGIPAFTMTTNSDGS
EDYSITLQILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFVMSPVLNEINDTAIQP
YLNEQVTAREAFDAAQVPIKAFMLKQTRIKDLETFVNMSGEQVTNPEDVSMAVLIPAFITSELKTAFQIGFMLFLPFLII
DLVVASVLMAMGMMMLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSFAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 8e-27 43
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 4e-27 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 4e-27 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 3e-27 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 3e-27 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_005023763.1 flagellar biosynthesis protein FliP VFG1259 Protein 3e-64 67
fliP YP_005023763.1 flagellar biosynthesis protein FliP VFG2016 Protein 6e-60 63
fliP YP_005023763.1 flagellar biosynthesis protein FliP VFG2494 Protein 7e-54 57
fliP YP_005023763.1 flagellar biosynthesis protein FliP VFG2338 Protein 4e-47 53