Gene Information

Name : VEJY3_09285 (VEJY3_09285)
Accession : YP_005023317.1
Strain :
Genome accession: NC_016613
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2071748 - 2072599 bp
Length : 852 bp
Strand : -
Note : COG2801 Transposase and inactivated derivatives

DNA sequence : 
ATGCTCGAACACCTTCTGTGCTTCAATGTTGTCCGCATGACTAAGGTGTTCGAAGTTTCACGAAGTGGGTTTTATTACTG
GATTAAGCATCGCCACAAGGCCATCCAGCGCGAGGCATTACGCCAAAAGCTCGATACAAAGGTCAAAGAGGCTTTTGACA
ATAGTAAAGGTCGTGATGGCTCAAGGCGCATCCAGAAAGAACTGGCGGAGAATGGTGATAGCCGTAATGTTAAAACCATT
GCAGCCAGTATGAAGCGTCAGGATTTAACTCCGAAAGCGGCACGCAAGTTTAAATGCACGACGGATAGCAAGCATAAGAT
GTCTGTAGCACCGAACTTGCTAGCTCAGGACTTTAACGCAACGGCTCCGAATCAAAAATGGGCAGGAGATATCACGTATA
TTGCCACGAGCGAAGGCTGGTTGTATCTGGCTGTCATCATCGACCTTTACTCACGACAAGTAATAGGTTGGTCAATGGAT
ACGAGGATGACGGCAACTCTGGTCTGCGATGCATTATCAATGGCTCTGTTCCGTCGAGGGTTCCCTGAGCATGTTATTGT
TCATAGTGATCGAGGTAGCCAGTATTGCTCAAAAGACTATAGGGACATAATAAGTGCTTATAATCTAGAACAAAGTACGA
GTAGAAAAGGAAACTGTTGGGATAATGCGTGTGTTGAGAGCTTCTTCCATTCTATGAAAGTTGAGGCGATCCAATACGAA
CCGATCATGAGCAGAGATGAGATGCGCCAAACGGTCTTCGAGTACATTGAAGTTGATTATAATCGGACAAGAAGGCACAG
TGCTCTTGGGTATCTAAGCCCAGTTAACTTTGAGCAGCAAAATGTCGCTTAA

Protein sequence : 
MLEHLLCFNVVRMTKVFEVSRSGFYYWIKHRHKAIQREALRQKLDTKVKEAFDNSKGRDGSRRIQKELAENGDSRNVKTI
AASMKRQDLTPKAARKFKCTTDSKHKMSVAPNLLAQDFNATAPNQKWAGDITYIATSEGWLYLAVIIDLYSRQVIGWSMD
TRMTATLVCDALSMALFRRGFPEHVIVHSDRGSQYCSKDYRDIISAYNLEQSTSRKGNCWDNACVESFFHSMKVEAIQYE
PIMSRDEMRQTVFEYIEVDYNRTRRHSALGYLSPVNFEQQNVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 7e-67 58
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-66 57
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-66 57
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 3e-66 57
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 6e-50 48
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 4e-50 48
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 7e-50 48
unnamed AAF09030.1 unknown Not tested SHI-O Protein 7e-50 48
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 8e-50 48
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 7e-50 48
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 4e-50 48
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 9e-49 47
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-49 47
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 6e-44 45
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-44 45
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-44 45
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-37 41
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-37 41
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-37 41
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-37 41
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-37 41
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-37 41
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-37 41
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 1e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEJY3_09285 YP_005023317.1 integrase VFG1631 Protein 7e-67 57
VEJY3_09285 YP_005023317.1 integrase VFG1706 Protein 4e-50 48
VEJY3_09285 YP_005023317.1 integrase VFG1122 Protein 6e-38 41