Gene Information

Name : KOX_02935 (KOX_02935)
Accession : YP_005016567.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 619377 - 620036 bp
Length : 660 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCATTTTACTGGTGGAAGACGACAAACTGATCGGCGACGGCCTTAAAACCGGACTGACCAAGCTGGGCTTCAGCGT
CGACTGGTTTACCCGCGGCGAAGAGGGCAAAGCCGCGCTGTACCACGCCCCTTACGACGCCATTATTCTGGACCTGACCC
TGCCCGGCATCGATGGGCTGGATATTCTGCGCGAATGGCGCGACAAAGGCCGCCACGAACCGGTACTGATCCTCACCGCC
CGCGACGCGCTCAGCCAGCGCGTTGAAGGGTTACGTCTCGGCGCCGATGACTACCTCTGCAAACCTTTCGCACTGGTTGA
AGTCGCCGCGCGTCTGGAAGCGCTGATGCGTCGCGCCCACGGCCACAGCAGCAGCGAGCTGCGGCACGGCAATGTTGTTC
TCGATCCGGGCCGACTCACGACCACGCTAAACGGCGAGAGCCTGCCGCTCAAGCCAAAGGAGTTTGCTCTGCTGGAACTC
CTGATGCGCAACGCCGGACGCGTGCTGCCGCGTAAGCTGATTGAGGAAAAGCTCTATAGCTGGGATGACGATGTCTCCAG
CAACGCGGTAGAAGTACACGTTCATCATCTGCGCCGTAAGCTCGGCAGCGGCTTCATTCGCACCGTGCACGGCATCGGCT
ATACCCTGGGGGACGCATGA

Protein sequence : 
MRILLVEDDKLIGDGLKTGLTKLGFSVDWFTRGEEGKAALYHAPYDAIILDLTLPGIDGLDILREWRDKGRHEPVLILTA
RDALSQRVEGLRLGADDYLCKPFALVEVAARLEALMRRAHGHSSSELRHGNVVLDPGRLTTTLNGESLPLKPKEFALLEL
LMRNAGRVLPRKLIEEKLYSWDDDVSSNAVEVHVHHLRRKLGSGFIRTVHGIGYTLGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-28 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_02935 YP_005016567.1 DNA-binding transcriptional regulator QseB BAC0487 Protein 8e-34 47
KOX_02935 YP_005016567.1 DNA-binding transcriptional regulator QseB BAC0197 Protein 3e-27 44
KOX_02935 YP_005016567.1 DNA-binding transcriptional regulator QseB BAC0308 Protein 4e-28 42
KOX_02935 YP_005016567.1 DNA-binding transcriptional regulator QseB BAC0083 Protein 9e-28 42
KOX_02935 YP_005016567.1 DNA-binding transcriptional regulator QseB BAC0638 Protein 5e-21 42
KOX_02935 YP_005016567.1 DNA-binding transcriptional regulator QseB NC_002516.2.879194.p Protein 8e-25 42
KOX_02935 YP_005016567.1 DNA-binding transcriptional regulator QseB BAC0111 Protein 2e-24 42
KOX_02935 YP_005016567.1 DNA-binding transcriptional regulator QseB BAC0347 Protein 3e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_02935 YP_005016567.1 DNA-binding transcriptional regulator QseB VFG0473 Protein 1e-32 46
KOX_02935 YP_005016567.1 DNA-binding transcriptional regulator QseB VFG1390 Protein 2e-23 42
KOX_02935 YP_005016567.1 DNA-binding transcriptional regulator QseB VFG1386 Protein 4e-22 41