Gene Information

Name : KOX_24750 (KOX_24750)
Accession : YP_005020904.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5326840 - 5329422 bp
Length : 2583 bp
Strand : +
Note : COG3188 P pilus assembly protein, porin PapC

DNA sequence :
ATGACTCCAGGATCTGCTCGCGTATTCGCGCAGATCCCCCTTGCCCTTTTACTTTCCTCACCGGCTTTTTACGCGCAGGC
GGAGCTCTATTTCAACCCACGCTTTCTGGCGGACGATCCCGCCGCCGTGGCGGATCTGTCCGGTTTTGAAAAGGGCCAGG
AGCTGCCGCCGGGTACCTATCGCGCGGATATCTACCTGAATGACGGGTATATGACCACCCGCGATATCACCTTTAATGCC
GCTGAAAAGGGCCACGGGCTGGCCCCCTGCCTGACCCGCGGACAGCTGGCCAGCATGGGCGTGAATACCGCGGCCATTGC
CGGAATCGACGTGCTGGCGGCGGATGCCTGCGTACCGCTAACCGAGATGATCAAAGACGCCACCACCCGCTTTGATGCCG
GGCAGCAGCGGCTGTATCTGACCGTGCCCCAGGCGTTTATGGGCAACCGCGCCCGCGGCTATATTCCGCCTGAGCTCTGG
GACCACGGAATTAACGCCGGGCTACTGAACTACAACTTCACCGGCAACAACGTGCACAACGACGTCGGCGGCAGCAGCAA
CTACGCGTACCTGAACCTGCAGAGCGGGCTGAACCTCGGCGCCTGGCGCCTGCGCGACAACACCACCTGGAGCTACAGCA
GCAGCGGCAGTTCGACGACCAATGAAAACAAATGGCAGCATATCAACTCGTGGCTTGAGCGTGATATTACGCTACTGCGT
TCGCGCCTCACGCTGGGCGACAGCTACACCAACGGCGACGTCTTTGACGGCATTAACTTCCGCGGCGCGCAGCTAGCTTC
CGACGACAATATGCTGCCGGACAGCCAGAAGGGTTTCGCCCCGGTCATTCACGGGATTGCCCGCGGCACGGCTCAGGTAT
CGGTCAAACAGAACGGCTATGAGATCTACCAGAGCACGGTGCCGCCCGGCCCGTTTACCATCAACGATCTCTACGCCGCG
GGCAACGGCGGCGACCTGCAGGTGACCATCAAAGAGGCCGACGGCAGCAGCCAGGTGTTCACCGTCCCCTACTCGTCCGT
TCCGGTGCTCCAGCGCGAGGGCCATACCCGCTATGCCGTTACCGCCGGTGAGTACCGCAGCGGCAGCAATCAGCAGGAAA
AACCGAAGTTCTTCCAGGGCACCCTGCTGCACGGCCTTCCGGCGGGCTGGACGCTGTATGGCGGCACCCAGCTGGCGGAC
CGCTACCGCGCCTTTAACCTCGGCGTGGGGAAAAACATGGGTGACCTGGGCGCGCTGTCGCTGGATATCACCCAGGCTAA
CGCCACCCTGCCCGATGACAGCGAGCATCAGGGGCAGTCGGTGCGCTTCCTCTATAACAAGTCGCTGACGGATACCGGCA
CCAATATTCAGCTGGTGGGCTACCGCTACTCGACGCGCGGCTACTTCAGCTTCGCCGATACCACCTACAGCCGGATGAGC
GGCTACAACGTCGAGACCCAGGACGGGGTGATTGAAGTGAAGCCAAAATTCACCGACTACTACAACCTCGCTTACAACAA
GCGCGGCAAAGTGCAGCTTAGCGTCACCCAGCAGCTGGGGCGCACCGCCACGCTCTATCTGAGCGGCAGCCACCAGACCT
ACTGGGGCACCGGCAAGGCCGATCAGCAGCTCCAGGCAGGACTCAACGCCGCCATCGACGATATCAACTGGACGCTCAGC
TACAGCCTGACCAAAAACGCCTGGCAGCAGGGGCGCGATCAGATGCTGGCGGTCAACGTCAATATTCCGTTCAGCCACTG
GCTGCGTTCCGACAGCAAGTCGGCCTGGCGGCACGCCAGCGCCAGCTACAGCATGTCCAACGATCTGAACGGCAGAACCA
CCAGCCTCGCCGGGCTGTACGGCACGCTGCTGGAGGACAACAACCTGAGCTACAGCATGCAGACCGGCTACGCCGGCGGC
GGTGAGGGCAACAGCGGCGGCACCGGCTACGCGGCGCTGAACTACCGCGGCGGCTACGGCAACGCCAACGTTGGCTACAG
CCGCAGCGACGGCATCAAACAGCTGTACTACGGCCTGAGCGGCGGCGTGCTGGCTCACGCCGACGGCGTCACCCTGAGCC
AGCCGATGAACGACACGGTGGTGCTGATCAAAGCCCCCGGCGCAGACAACGTCAAAGTGGAAAACCAGACCGGGGTTCAG
ACCGACTGGCGCGGCTACGCCGTGCTGCCCTACGCCACCGAATACCGGGAAAACCGGGTGGCGCTGGACACCAACAGCCT
GGCCGATAACGTCGACCTGGACGATGCGGTGGCCAGCGTGGTGCCGACCCACGGCGCGATTGTCCGCGCGGAGTTTAAGG
TCCACGTCGGGCTCAAGCTGCTGATGTCTCTCATCTACAACGGTAAGCCGGTTCCCTTCGGCGCGCTGGTGACTTCTGAC
GGCAGCCAGGCCAGCAGCATCGTCGCCGATAACGGCCAGGTCTACCTGAGCGGGATGCCCCTGGCGGGCAAAGTGCGGGC
GAAATGGGGCGAAGGTCCGAACGCCAGCTGCGAGGCTGACTACAGCCTGCCGCCGGAAAAACAGAACCAGATGCTGATCC
CGCTGTCCGCCGAGTGCCGCTAA

Protein sequence :
MTPGSARVFAQIPLALLLSSPAFYAQAELYFNPRFLADDPAAVADLSGFEKGQELPPGTYRADIYLNDGYMTTRDITFNA
AEKGHGLAPCLTRGQLASMGVNTAAIAGIDVLAADACVPLTEMIKDATTRFDAGQQRLYLTVPQAFMGNRARGYIPPELW
DHGINAGLLNYNFTGNNVHNDVGGSSNYAYLNLQSGLNLGAWRLRDNTTWSYSSSGSSTTNENKWQHINSWLERDITLLR
SRLTLGDSYTNGDVFDGINFRGAQLASDDNMLPDSQKGFAPVIHGIARGTAQVSVKQNGYEIYQSTVPPGPFTINDLYAA
GNGGDLQVTIKEADGSSQVFTVPYSSVPVLQREGHTRYAVTAGEYRSGSNQQEKPKFFQGTLLHGLPAGWTLYGGTQLAD
RYRAFNLGVGKNMGDLGALSLDITQANATLPDDSEHQGQSVRFLYNKSLTDTGTNIQLVGYRYSTRGYFSFADTTYSRMS
GYNVETQDGVIEVKPKFTDYYNLAYNKRGKVQLSVTQQLGRTATLYLSGSHQTYWGTGKADQQLQAGLNAAIDDINWTLS
YSLTKNAWQQGRDQMLAVNVNIPFSHWLRSDSKSAWRHASASYSMSNDLNGRTTSLAGLYGTLLEDNNLSYSMQTGYAGG
GEGNSGGTGYAALNYRGGYGNANVGYSRSDGIKQLYYGLSGGVLAHADGVTLSQPMNDTVVLIKAPGADNVKVENQTGVQ
TDWRGYAVLPYATEYRENRVALDTNSLADNVDLDDAVASVVPTHGAIVRAEFKVHVGLKLLMSLIYNGKPVPFGALVTSD
GSQASSIVADNGQVYLSGMPLAGKVRAKWGEGPNASCEADYSLPPEKQNQMLIPLSAECR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2D AFH78429.1 putative fimbrial usher protein Virulence KpGI-5 Protein 0.0 82
sfaF CAC16953.2 SfaF protein Virulence PAI III 536 Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_24750 YP_005020904.1 hypothetical protein VFG0876 Protein 0.0 82
KOX_24750 YP_005020904.1 hypothetical protein VFG1645 Protein 0.0 66
KOX_24750 YP_005020904.1 hypothetical protein VFG0912 Protein 0.0 66
KOX_24750 YP_005020904.1 hypothetical protein VFG0446 Protein 2e-174 48
KOX_24750 YP_005020904.1 hypothetical protein VFG0454 Protein 2e-156 44