Gene Information

Name : KOX_24745 (KOX_24745)
Accession : YP_005020903.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Virulence
Product : chaperone FimC, periplasmic
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5326010 - 5326720 bp
Length : 711 bp
Strand : +
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGAAAAATAGACGGGCTACCACGCGCGGGATGCGCGGTTTACTGGCAGGACTCCTGCTGCTCTCCACCGCCGGTTTTAC
CGCTCAGGCGCAGGCCGGCGTGGCGCTGGGCGCGACCCGCGTGATTTATCCGGCCGGACAGAAACAGGCTCAGCTGGCGG
TGACCAATAACGACGACAGCACCTATCTGATCCAGTCATGGGTAGAGAACGCCGATGGCGCGAAAGACGGGAGCTTTGTC
ATTACCCCGCCGCTGTTCGCCATGCAGGGGAAGAAAGAGAATACTCTGCGCATCCTCGATGCCACCAATGGCCGGCTGCC
GCAGGACCGGGAAACGCTGTTCTGGATGAACGTCAAAGCAATTCCATCGATGGATAAATCAAAGCTCAGCGAAAACACGC
TACAGCTGGCGATTATCAGCCGTATCAAGCTTTATTACCGCCCGGCCAAACTGGCGCTACCGCCGGATCAGGCCGCGGAA
AAGCTGAAGTTCCGCCGCAGCGGAAGCTCACTCACGCTGATTAACCCAACCCCTTATTACCAGACGGTCACCGAGCTCAA
CGCCGGAACCCGGGTGCTGAAAAATGCGCTGGTCCCGCCGATGGGCGAAGCCAGCGTCAGTTTACCGTCCGATGCAGGTC
GCGAGATTACATACCGGACGATTAACGACTACGGCGCACTCACCCCGCGTATGAAAGGCGTCATGCAGTAA

Protein sequence : 
MKNRRATTRGMRGLLAGLLLLSTAGFTAQAQAGVALGATRVIYPAGQKQAQLAVTNNDDSTYLIQSWVENADGAKDGSFV
ITPPLFAMQGKKENTLRILDATNGRLPQDRETLFWMNVKAIPSMDKSKLSENTLQLAIISRIKLYYRPAKLALPPDQAAE
KLKFRRSGSSLTLINPTPYYQTVTELNAGTRVLKNALVPPMGEASVSLPSDAGREITYRTINDYGALTPRMKGVMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-80 84
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 1e-67 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KOX_24745 YP_005020903.1 chaperone FimC, periplasmic VFG0875 Protein 7e-86 88
KOX_24745 YP_005020903.1 chaperone FimC, periplasmic VFG0911 Protein 4e-68 69
KOX_24745 YP_005020903.1 chaperone FimC, periplasmic VFG1644 Protein 8e-68 68
KOX_24745 YP_005020903.1 chaperone FimC, periplasmic VFG0445 Protein 5e-51 51
KOX_24745 YP_005020903.1 chaperone FimC, periplasmic VFG0455 Protein 7e-39 41