Gene Information

Name : xerD (KOX_02390)
Accession : YP_005016458.1
Strain : Klebsiella oxytoca KCTC 1686
Genome accession: NC_016612
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 507534 - 508430 bp
Length : 897 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
GTGGAACAGGATCTCGCACAAATCGAGCAGTTTCTTGATGCCTTATGGCTGGAGCGGAATCTGGCGGAGAACACGCTAAG
CGCCTACCGCCGGGACCTGACGATGGTGGTCGAATGGCTGCATCATCGTGGCCTGTCGCTTGCCAGCGTCAGCGGCGAAG
ATCTCCAGTCGCTGCTGGCGGAGCGGCAAACCGGCGGCTATAAAGCCACCAGCACCGCGCGCCTGCTAAGCGCCGTGCGC
CGTTTCTTCCAGCATCTTTACCGGGAGAAAATTCGCCCGGACGATCCCAGCGCGCTGTTGGCCTCGCCAAAGCTGCCGCA
GAGGCTGCCGAAGGATCTGAGCGAGGCGCAGGTGGAACGCCTGCTCCAGGCGCCGCTGGTTGAACAACCGCTGGAGCTGC
GCGATAAAGCGATGCTGGAAGTGCTGTACGCCACCGGTCTGCGCGTTTCCGAGCTGGTGGGCCTGACCATGAGCGACATT
AGCCTGCGACAGGGCGTGCTGCGCGTGATTGGTAAAGGAAATAAAGAACGTCTGGTACCGCTGGGTGAAGAGGCGGTGCT
GTGGGTTGAGAATTACCTTGAATACGGGCGCCCCTGGCTGCTGAACGGCGTGGCGTCCGATGTGCTTTTTCCCAGCCAGC
GCGCGCAGCAGATGACGCGCCAGACGTTCTGGCATCGAATTAAGCACTATGCCGTACTGGCAGGGATTGACAGCGAAAAG
CTCTCCCCGCACGTGTTACGCCATGCGTTCGCGACGCATTTACTTAACCATGGCGCCGACTTACGCGTGGTGCAGATGCT
GTTAGGACACAGCGATCTCTCCACGACGCAGATCTACACCCACGTGGCGACCGAGCGTCTGCGACAACTCCATCAACAGC
ATCACCCGCGTGCGTGA

Protein sequence :
MEQDLAQIEQFLDALWLERNLAENTLSAYRRDLTMVVEWLHHRGLSLASVSGEDLQSLLAERQTGGYKATSTARLLSAVR
RFFQHLYREKIRPDDPSALLASPKLPQRLPKDLSEAQVERLLQAPLVEQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
SLRQGVLRVIGKGNKERLVPLGEEAVLWVENYLEYGRPWLLNGVASDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-63 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-63 54